DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENN
Uniprot ID:
Q9BXS6
Source protein:
Nucleolar and spindle-associated protein 1
Source gene:
NUSAP1
Class:
DEG_APCC_KENBOX_2
Location:
383:387
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7978
ASA_SCORE:
98.68
COIL:
0.7356
CONS_SCORE:
0.513
DSS_SCORE:
0.5253
HELIX:
0.2206
FCONS_SCORE:
0.9424
RIG_SCORE:
0.6992
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K374T
TCGA-85-6561
LUSC
TCGA
SKENN
DEG_APCC_KENBOX_2
0.1944
p.K374T
DO26518
LUSC
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1944
p.Q391H
TCGA-B5-A0JN
UCEC
TCGA
SKENN
DEG_APCC_KENBOX_2
0.2222
p.Q391H
DO41943
UCEC
ICGC
SKENN
DEG_APCC_KENBOX_2
0.2222
p.V393F
DO229032
LICA
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1667
p.H373Y
SIDM00217
Colorectal Carcinoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with NUSAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29508
Serpin B3
DEG_APCC_KENBOX_2
22:26
SKENN
APC,CDC20,FZR1
0.5575
More...
Q02446
Transcription factor Sp4
DEG_APCC_KENBOX_2
112:116
SKENN
APC,CDC20,FZR1
0.8709
More...
Q86W56
Poly
DEG_APCC_KENBOX_2
98:102
SKENN
APC,CDC20,FZR1
0.9861
More...
Q9BXS6
Nucleolar and spindle-associated protein 1
DEG_APCC_KENBOX_2
383:387
SKENN
APC,CDC20,FZR1
0.7978
More...