DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENN
Uniprot ID:
Q02446
Source protein:
Transcription factor Sp4
Source gene:
SP4
Class:
DEG_APCC_KENBOX_2
Location:
112:116
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8709
ASA_SCORE:
100.28
COIL:
0.7138
CONS_SCORE:
0.2872
DSS_SCORE:
0.6173
HELIX:
0.1572
FCONS_SCORE:
0.8841
RIG_SCORE:
0.6113
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S112L
TCGA-CN-6995
HNSC
TCGA
SKENN
DEG_APCC_KENBOX_2
0.6556
p.S112L
DO14854
HNSC
ICGC
SKENN
DEG_APCC_KENBOX_2
0.6556
p.Q119E
DO225215
BRCA
ICGC
SKENN
DEG_APCC_KENBOX_2
0.25
p.Q119E
DO227836
BRCA
ICGC
SKENN
DEG_APCC_KENBOX_2
0.25
p.L104I
DO27931
ORCA
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.K113Q
ACH-000996
Endometrial/Uterine Cancer
CCLE
SKENN
DEG_APCC_KENBOX_2
0.6944
p.S126N
ACH-001484
Leukemia
CCLE
SKENN
DEG_APCC_KENBOX_2
0.5
p.S126N
ACH-001485
Leukemia
CCLE
SKENN
DEG_APCC_KENBOX_2
0.5
Drug responses associated with SP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29508
Serpin B3
DEG_APCC_KENBOX_2
22:26
SKENN
APC,CDC20,FZR1
0.5575
More...
Q02446
Transcription factor Sp4
DEG_APCC_KENBOX_2
112:116
SKENN
APC,CDC20,FZR1
0.8709
More...
Q86W56
Poly
DEG_APCC_KENBOX_2
98:102
SKENN
APC,CDC20,FZR1
0.9861
More...
Q9BXS6
Nucleolar and spindle-associated protein 1
DEG_APCC_KENBOX_2
383:387
SKENN
APC,CDC20,FZR1
0.7978
More...