DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENN
Uniprot ID:
Q86W56
Source protein:
Poly
Source gene:
PARG
Class:
DEG_APCC_KENBOX_2
Location:
98:102
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9861
ASA_SCORE:
103.92
COIL:
0.733
CONS_SCORE:
0.2696
DSS_SCORE:
0.5594
HELIX:
0.2316
FCONS_SCORE:
1.0038
RIG_SCORE:
0.6651
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q106E
TCGA-37-A5EN
LUSC
TCGA
SKENN
DEG_APCC_KENBOX_2
0.2222
p.Q106E
DO223720
LUSC
ICGC
SKENN
DEG_APCC_KENBOX_2
0.2222
p.D90N
TCGA-F5-6814
READ
TCGA
SKENN
DEG_APCC_KENBOX_2
0.1111
p.D90N
DO36556
READ
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.V95A
TCGA-L5-A8NS
ESCA
TCGA
SKENN
DEG_APCC_KENBOX_2
0.25
p.M110I
SIDM00594
Acute Myeloid Leukemia
GDSC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.M110I
SIDM00599
Osteosarcoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.M110I
SIDM01986
Non-Small Cell Lung Carcinoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.M110I
SIDM00574
Glioblastoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.M110I
SIDM00580
Acute Myeloid Leukemia
GDSC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.M110I
SIDM00989
Bladder Carcinoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.S95G
SIDM00386
Ewing's Sarcoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.25
p.S95G
SIDM00515
Melanoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.25
p.L96F
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.2778
p.L96F
SIDM00849
Kidney Carcinoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.2778
p.R105I
SIDM00580
Acute Myeloid Leukemia
GDSC
SKENN
DEG_APCC_KENBOX_2
0.25
p.E100A
SIDM00118
Colorectal Carcinoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.7701
p.S112Y
SIDM01611
Endometrial Carcinoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.5
p.W92C
ACH-000911
Gastric Cancer
CCLE
SKENN
DEG_APCC_KENBOX_2
0.1667
p.D90A
ACH-000978
Endometrial/Uterine Cancer
CCLE
SKENN
DEG_APCC_KENBOX_2
0.1111
Drug responses associated with PARG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29508
Serpin B3
DEG_APCC_KENBOX_2
22:26
SKENN
APC,CDC20,FZR1
0.5575
More...
Q02446
Transcription factor Sp4
DEG_APCC_KENBOX_2
112:116
SKENN
APC,CDC20,FZR1
0.8709
More...
Q86W56
Poly
DEG_APCC_KENBOX_2
98:102
SKENN
APC,CDC20,FZR1
0.9861
More...
Q9BXS6
Nucleolar and spindle-associated protein 1
DEG_APCC_KENBOX_2
383:387
SKENN
APC,CDC20,FZR1
0.7978
More...