DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENP
Uniprot ID:
P37802
Source protein:
Transgelin-2
Source gene:
TAGLN2
Class:
DEG_APCC_KENBOX_2
Location:
155:159
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9256
ASA_SCORE:
88
COIL:
0.8628
CONS_SCORE:
0.4264
DSS_SCORE:
0.6408
HELIX:
0.0898
FCONS_SCORE:
0.8945
RIG_SCORE:
0.6749
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L167V
TCGA-85-7696
LUSC
TCGA
SKENP
DEG_APCC_KENBOX_2
0.1111
p.L167V
DO26671
LUSC
ICGC
SKENP
DEG_APCC_KENBOX_2
0.1111
p.K153N
TCGA-AP-A1DV
UCEC
TCGA
SKENP
DEG_APCC_KENBOX_2
0.7222
p.K153N
DO43186
UCEC
ICGC
SKENP
DEG_APCC_KENBOX_2
0.7222
p.P148H
TCGA-EE-A181
SKCM
TCGA
SKENP
DEG_APCC_KENBOX_2
0.1389
p.P148H
DO37444
SKCM
ICGC
SKENP
DEG_APCC_KENBOX_2
0.1389
p.D147N
DO228331
BRCA
ICGC
SKENP
DEG_APCC_KENBOX_2
0.1111
p.P159H
ACH-000343
Lung Cancer
CCLE
SKENP
DEG_APCC_KENBOX_2
0.6583
p.P159H
ACH-000982
Colon/Colorectal Cancer
CCLE
SKENP
DEG_APCC_KENBOX_2
0.6583
p.P159H
NCI-H522
lung
COSMIC
SKENP
DEG_APCC_KENBOX_2
0.6583
p.P159L
ACH-000939
Sarcoma
CCLE
SKENP
DEG_APCC_KENBOX_2
0.6471
p.P159L
SK-UT-1
soft_tissue
COSMIC
SKENP
DEG_APCC_KENBOX_2
0.6471
p.N165Y
ACH-002147
Skin Cancer
CCLE
SKENP
DEG_APCC_KENBOX_2
0.1667
p.N165Y
K2
skin
COSMIC
SKENP
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with TAGLN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P37802
Transgelin-2
DEG_APCC_KENBOX_2
155:159
SKENP
APC,CDC20,FZR1
0.9256
More...
Q15283
Ras GTPase-activating protein 2
DEG_APCC_KENBOX_2
840:844
SKENP
APC,CDC20,FZR1
0.9812
More...
Q8TBG4
Ethanolamine-phosphate phospho-lyase
DEG_APCC_KENBOX_2
474:478
SKENP
APC,CDC20,FZR1
0.828
More...
Q8N999
Uncharacterized protein C12orf29
DEG_APCC_KENBOX_2
96:100
SKENP
APC,CDC20,FZR1
0.6542
More...