DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENP
Uniprot ID:
Q15283
Source protein:
Ras GTPase-activating protein 2
Source gene:
RASA2
Class:
DEG_APCC_KENBOX_2
Location:
840:844
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9812
ASA_SCORE:
65.1
COIL:
0.7094
CONS_SCORE:
0.3811
DSS_SCORE:
0.6636
HELIX:
0.1584
FCONS_SCORE:
1.0548
RIG_SCORE:
0.6429
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P843L
TCGA-18-3409
LUSC
TCGA
SKENP
DEG_APCC_KENBOX_2
0.7582
p.P843L
SIDM01175
Other Sarcomas
GDSC
SKENP
DEG_APCC_KENBOX_2
0.7582
p.P843L
ACH-002309
Sarcoma
CCLE
SKENP
DEG_APCC_KENBOX_2
0.7582
p.P843L
SW684
soft_tissue
COSMIC
SKENP
DEG_APCC_KENBOX_2
0.7582
p.P843S
TCGA-YD-A9TA
SKCM
TCGA
SKENP
DEG_APCC_KENBOX_2
0.6752
p.K837R
DO233081
GACA
ICGC
SKENP
DEG_APCC_KENBOX_2
0.3611
p.P844L
DO26444
LUSC
ICGC
SKENP
DEG_APCC_KENBOX_2
0.6471
p.P844S
DO219503
SKCM
ICGC
SKENP
DEG_APCC_KENBOX_2
0.5641
p.P847L
SW684
soft_tissue
COSMIC
SKENP
DEG_APCC_KENBOX_2
0.25
Drug responses associated with RASA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P37802
Transgelin-2
DEG_APCC_KENBOX_2
155:159
SKENP
APC,CDC20,FZR1
0.9256
More...
Q15283
Ras GTPase-activating protein 2
DEG_APCC_KENBOX_2
840:844
SKENP
APC,CDC20,FZR1
0.9812
More...
Q8TBG4
Ethanolamine-phosphate phospho-lyase
DEG_APCC_KENBOX_2
474:478
SKENP
APC,CDC20,FZR1
0.828
More...
Q8N999
Uncharacterized protein C12orf29
DEG_APCC_KENBOX_2
96:100
SKENP
APC,CDC20,FZR1
0.6542
More...