DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SKENP
Uniprot ID:
Q8TBG4
Source protein:
Ethanolamine-phosphate phospho-lyase
Source gene:
ETNPPL
Class:
DEG_APCC_KENBOX_2
Location:
474:478
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.828
ASA_SCORE:
96.22
COIL:
0.8522
CONS_SCORE:
0.1006
DSS_SCORE:
0.6747
HELIX:
0.1356
FCONS_SCORE:
1.1021
RIG_SCORE:
0.6285
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D469E
TCGA-97-7937
LUAD
TCGA
SKENP
DEG_APCC_KENBOX_2
0.1944
p.D469E
DO25649
LUAD
ICGC
SKENP
DEG_APCC_KENBOX_2
0.1944
p.I464V
TCGA-BR-4184
STAD
TCGA
SKENP
DEG_APCC_KENBOX_2
0.0556
p.I464V
DO38328
STAD
ICGC
SKENP
DEG_APCC_KENBOX_2
0.0556
p.G484A
TCGA-YC-A9TC
BLCA
TCGA
SKENP
DEG_APCC_KENBOX_2
0.1667
p.G484A
DO51949
BLCA
ICGC
SKENP
DEG_APCC_KENBOX_2
0.1667
p.G484A
DO234278
ESAD
ICGC
SKENP
DEG_APCC_KENBOX_2
0.1667
p.T487M
DO230342
COCA
ICGC
SKENP
DEG_APCC_KENBOX_2
0.0833
p.L466M
DO229006
LICA
ICGC
SKENP
DEG_APCC_KENBOX_2
0.1111
p.S474F
DO230940
LUSC
ICGC
SKENP
DEG_APCC_KENBOX_2
0.6871
p.S474F
DO224584
LUSC
ICGC
SKENP
DEG_APCC_KENBOX_2
0.6871
Drug responses associated with ETNPPL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P37802
Transgelin-2
DEG_APCC_KENBOX_2
155:159
SKENP
APC,CDC20,FZR1
0.9256
More...
Q15283
Ras GTPase-activating protein 2
DEG_APCC_KENBOX_2
840:844
SKENP
APC,CDC20,FZR1
0.9812
More...
Q8TBG4
Ethanolamine-phosphate phospho-lyase
DEG_APCC_KENBOX_2
474:478
SKENP
APC,CDC20,FZR1
0.828
More...
Q8N999
Uncharacterized protein C12orf29
DEG_APCC_KENBOX_2
96:100
SKENP
APC,CDC20,FZR1
0.6542
More...