DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENR
Uniprot ID:
Q14CB8
Source protein:
Rho GTPase-activating protein 19
Source gene:
ARHGAP19
Class:
DEG_APCC_KENBOX_2
Location:
459:463
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.996
ASA_SCORE:
104.82
COIL:
0.5172
CONS_SCORE:
0.5522
DSS_SCORE:
0.5057
HELIX:
0.4546
FCONS_SCORE:
1.2068
RIG_SCORE:
0.7121
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E461K
TCGA-AZ-4315
COAD
TCGA
SKENR
DEG_APCC_KENBOX_2
0.7022
p.E461K
DO8842
COAD
ICGC
SKENR
DEG_APCC_KENBOX_2
0.7022
p.R463M
TCGA-D3-A2JB
SKCM
TCGA
SKENR
DEG_APCC_KENBOX_2
0.7521
p.R463M
DO47607
SKCM
ICGC
SKENR
DEG_APCC_KENBOX_2
0.7521
p.E461Q
TCGA-XF-A8HD
BLCA
TCGA
SKENR
DEG_APCC_KENBOX_2
0.6744
p.E461Q
DO49795
BLCA
ICGC
SKENR
DEG_APCC_KENBOX_2
0.6744
p.S468C
TCGA-XF-AAN0
BLCA
TCGA
SKENR
DEG_APCC_KENBOX_2
0.1944
p.S468C
DO51941
BLCA
ICGC
SKENR
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with ARHGAP19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14CB8
Rho GTPase-activating protein 19
DEG_APCC_KENBOX_2
459:463
SKENR
APC,CDC20,FZR1
0.996
More...
Q4G0J3
La-related protein 7
DEG_APCC_KENBOX_2
328:332
SKENR
APC,CDC20,FZR1
0.9758
More...
Q86X24
HORMA domain-containing protein 1
DEG_APCC_KENBOX_2
354:358
SKENR
APC,CDC20,FZR1
0.9971
More...
Q9HCZ1
Zinc finger protein 334
DEG_APCC_KENBOX_2
155:159
SKENR
APC,CDC20,FZR1
0.9989
More...