DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENR
Uniprot ID:
Q86X24
Source protein:
HORMA domain-containing protein 1
Source gene:
HORMAD1
Class:
DEG_APCC_KENBOX_2
Location:
354:358
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9971
ASA_SCORE:
116.04
COIL:
0.7512
CONS_SCORE:
0.4202
DSS_SCORE:
0.8095
HELIX:
0.2512
FCONS_SCORE:
1.1088
RIG_SCORE:
0.6227
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R358W
TCGA-3B-A9HT
SARC
TCGA
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
TCGA-AA-A00N
COAD
TCGA
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
TCGA-B5-A1MR
UCEC
TCGA
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
TCGA-E6-A1LX
UCEC
TCGA
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
TCGA-FR-A8YC
SKCM
TCGA
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
DO9876
COAD
ICGC
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
DO219934
SARC
ICGC
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
DO50301
SKCM
ICGC
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
DO41020
UCEC
ICGC
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358W
DO41758
UCEC
ICGC
SKENR
DEG_APCC_KENBOX_2
0.7523
p.R358Q
TCGA-AP-A1DR
UCEC
TCGA
SKENR
DEG_APCC_KENBOX_2
0.6218
p.R358Q
DO43747
UCEC
ICGC
SKENR
DEG_APCC_KENBOX_2
0.6218
p.R358Q
SIDM01587
Bladder Carcinoma
GDSC
SKENR
DEG_APCC_KENBOX_2
0.6218
p.G347E
TCGA-D3-A8GL
SKCM
TCGA
SKENR
DEG_APCC_KENBOX_2
0.1389
p.G347E
TCGA-GN-A266
SKCM
TCGA
SKENR
DEG_APCC_KENBOX_2
0.1389
p.G347E
DO37432
SKCM
ICGC
SKENR
DEG_APCC_KENBOX_2
0.1389
p.G347E
DO50287
SKCM
ICGC
SKENR
DEG_APCC_KENBOX_2
0.1389
p.Q362K
TCGA-E6-A1LX
UCEC
TCGA
SKENR
DEG_APCC_KENBOX_2
0.2222
p.Q362K
DO41020
UCEC
ICGC
SKENR
DEG_APCC_KENBOX_2
0.2222
p.G366E
TCGA-FW-A3R5
SKCM
TCGA
SKENR
DEG_APCC_KENBOX_2
0.1111
p.G366E
DO37406
SKCM
ICGC
SKENR
DEG_APCC_KENBOX_2
0.1111
p.S353Y
TCGA-ND-A4WC
UCS
TCGA
SKENR
DEG_APCC_KENBOX_2
0.3056
p.G347A
DO228268
BRCA
ICGC
SKENR
DEG_APCC_KENBOX_2
0.1389
p.S354Y
DO228974
LICA
ICGC
SKENR
DEG_APCC_KENBOX_2
0.6009
p.R360T
SIDM00281
Other Solid Cancers
GDSC
SKENR
DEG_APCC_KENBOX_2
0.2778
p.R360T
ACH-002100
Skin Cancer
CCLE
SKENR
DEG_APCC_KENBOX_2
0.2778
p.R360T
DJM-1
skin
COSMIC
SKENR
DEG_APCC_KENBOX_2
0.2778
p.G347R
SIDM00140
Melanoma
GDSC
SKENR
DEG_APCC_KENBOX_2
0.1389
p.G347R
ACH-000968
Skin Cancer
CCLE
SKENR
DEG_APCC_KENBOX_2
0.1389
p.G347R
COLO-792
skin
COSMIC
SKENR
DEG_APCC_KENBOX_2
0.1389
p.R353T
DJM-1
skin
COSMIC
SKENR
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with HORMAD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14CB8
Rho GTPase-activating protein 19
DEG_APCC_KENBOX_2
459:463
SKENR
APC,CDC20,FZR1
0.996
More...
Q4G0J3
La-related protein 7
DEG_APCC_KENBOX_2
328:332
SKENR
APC,CDC20,FZR1
0.9758
More...
Q86X24
HORMA domain-containing protein 1
DEG_APCC_KENBOX_2
354:358
SKENR
APC,CDC20,FZR1
0.9971
More...
Q9HCZ1
Zinc finger protein 334
DEG_APCC_KENBOX_2
155:159
SKENR
APC,CDC20,FZR1
0.9989
More...