DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SPETGE
Uniprot ID:
Q08174
Source protein:
Protocadherin-1
Source gene:
PCDH1
Class:
DEG_Kelch_Keap1_1
Location:
558:563
E3 ligase:
KEAP1
DEGRON score:
0.9864
ASA_SCORE:
56.35
COIL:
0.7205
CONS_SCORE:
0.6405
DSS_SCORE:
0.4347
HELIX:
0.0185
FCONS_SCORE:
1.0903
RIG_SCORE:
0.7327
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L570V
TCGA-B0-4698
KIRC
TCGA
SPETGE
DEG_Kelch_Keap1_1
0.1389
p.L570V
DO20368
KIRC
ICGC
SPETGE
DEG_Kelch_Keap1_1
0.1389
p.S569T
TCGA-GS-A9TT
DLBC
TCGA
SPETGE
DEG_Kelch_Keap1_1
0.1667
p.S569T
DO219912
DLBC
ICGC
SPETGE
DEG_Kelch_Keap1_1
0.1667
p.R572W
DO234235
ESAD
ICGC
SPETGE
DEG_Kelch_Keap1_1
0.0833
p.R572W
DO27851
MALY
ICGC
SPETGE
DEG_Kelch_Keap1_1
0.0833
p.T568A
DO229051
LICA
ICGC
SPETGE
DEG_Kelch_Keap1_1
0.1944
p.A551V
DO23428
LINC
ICGC
SPETGE
DEG_Kelch_Keap1_1
0.1389
p.T568K
SIDM00124
Kidney Carcinoma
GDSC
SPETGE
DEG_Kelch_Keap1_1
0.1944
p.T568K
ACH-000555
Kidney Cancer
CCLE
SPETGE
DEG_Kelch_Keap1_1
0.1944
p.T568K
A498
kidney
COSMIC
SPETGE
DEG_Kelch_Keap1_1
0.1944
Drug responses associated with PCDH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SPETGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q08174
Protocadherin-1
DEG_Kelch_Keap1_1
558:563
SPETGE
KEAP1
0.9864
More...
Q5JTC6
APC membrane recruitment protein 1
DEG_Kelch_Keap1_1
286:291
SPETGE
KEAP1
0.9946
More...
Q9NQV8
PR domain zinc finger protein 8
DEG_Kelch_Keap1_1
375:380
SPETGE
KEAP1
0.8975
More...
Q9NP08
Homeobox protein HMX1
DEG_Kelch_Keap1_1
137:142
SPETGE
KEAP1
0.9676
More...