DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VFTSS
Uniprot ID:
A5PL33
Source protein:
Protein KRBA1
Source gene:
KRBA1
Class:
DEG_SPOP_SBC_1
Location:
573:577
E3 ligase:
SPOP
DEGRON score:
0.85
ASA_SCORE:
88.48
COIL:
0.9316
CONS_SCORE:
0.4557
DSS_SCORE:
0.2809
HELIX:
0.0422
FCONS_SCORE:
0.7055
RIG_SCORE:
0.7518
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S576T
TCGA-34-8454
LUSC
TCGA
VFTSS
DEG_SPOP_SBC_1
0.6005
p.S576T
DO50094
LUSC
ICGC
VFTSS
DEG_SPOP_SBC_1
0.6005
p.V578I
TCGA-HU-A4GX
STAD
TCGA
VFTSS
DEG_SPOP_SBC_1
0.3056
p.V578I
DO222905
BTCA
ICGC
VFTSS
DEG_SPOP_SBC_1
0.3056
p.V578I
DO47757
STAD
ICGC
VFTSS
DEG_SPOP_SBC_1
0.3056
p.R563Q
DO222432
ESCA
ICGC
VFTSS
DEG_SPOP_SBC_1
0.0556
p.S569I
DO229026
LICA
ICGC
VFTSS
DEG_SPOP_SBC_1
0.2222
p.R587H
SIDM00778
Colorectal Carcinoma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.0556
p.R587H
SIDM01774
Pancreatic Carcinoma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.0556
p.P563L
SIDM01045
Endometrial Carcinoma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.0556
p.P563L
EN
endometrium
COSMIC
VFTSS
DEG_SPOP_SBC_1
0.0556
p.E567Q
SIDM01690
Plasma Cell Myeloma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.S576N
ACH-000830
Lung Cancer
CCLE
VFTSS
DEG_SPOP_SBC_1
0.7069
p.A570T
ACH-000930
Breast Cancer
CCLE
VFTSS
DEG_SPOP_SBC_1
0.6944
p.S583F
ACH-000935
Colon/Colorectal Cancer
CCLE
VFTSS
DEG_SPOP_SBC_1
0.1667
p.A570V
ACH-000978
Endometrial/Uterine Cancer
CCLE
VFTSS
DEG_SPOP_SBC_1
0.6944
Drug responses associated with KRBA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08779
Keratin, type I cytoskeletal 16
DEG_SPOP_SBC_1
443:447
VFTSS
SPOP
0.9648
More...
Q2M1Z3
Rho GTPase-activating protein 31
DEG_SPOP_SBC_1
465:469
VFTSS
SPOP
0.8674
More...
Q9ULE0
Protein WWC3
DEG_SPOP_SBC_1
727:731
VFTSS
SPOP
0.9576
More...
A5PL33
Protein KRBA1
DEG_SPOP_SBC_1
573:577
VFTSS
SPOP
0.85
More...