DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VFTSS
Uniprot ID:
Q9ULE0
Source protein:
Protein WWC3
Source gene:
WWC3
Class:
DEG_SPOP_SBC_1
Location:
727:731
E3 ligase:
SPOP
DEGRON score:
0.9576
ASA_SCORE:
68.04
COIL:
0.6738
CONS_SCORE:
0.2884
DSS_SCORE:
0.4334
HELIX:
0.0232
FCONS_SCORE:
0.7702
RIG_SCORE:
0.721
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H723L
TCGA-43-3394
LUSC
TCGA
VFTSS
DEG_SPOP_SBC_1
0.2222
p.H723L
DO26596
LUSC
ICGC
VFTSS
DEG_SPOP_SBC_1
0.2222
p.S724F
TCGA-44-3918
LUAD
TCGA
VFTSS
DEG_SPOP_SBC_1
0.25
p.S724F
DO23732
LUAD
ICGC
VFTSS
DEG_SPOP_SBC_1
0.25
p.H723D
TCGA-60-2714
LUSC
TCGA
VFTSS
DEG_SPOP_SBC_1
0.2222
p.H723D
DO26530
LUSC
ICGC
VFTSS
DEG_SPOP_SBC_1
0.2222
p.E738D
TCGA-B5-A11J
UCEC
TCGA
VFTSS
DEG_SPOP_SBC_1
0.1389
p.E738D
DO43698
UCEC
ICGC
VFTSS
DEG_SPOP_SBC_1
0.1389
p.R721C
TCGA-BK-A6W3
UCEC
TCGA
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R721C
DO50076
UCEC
ICGC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R721C
SIDM02013
Colorectal Carcinoma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R737W
TCGA-BS-A0UF
UCEC
TCGA
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R737W
TCGA-F1-6874
STAD
TCGA
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R737W
DO38201
STAD
ICGC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R737W
DO41488
UCEC
ICGC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.A739V
TCGA-EO-A22U
UCEC
TCGA
VFTSS
DEG_SPOP_SBC_1
0.1111
p.A739V
DO43755
UCEC
ICGC
VFTSS
DEG_SPOP_SBC_1
0.1111
p.W722C
TCGA-IC-A6RE
ESCA
TCGA
VFTSS
DEG_SPOP_SBC_1
0.1944
p.C741G
DO48436
BLCA
ICGC
VFTSS
DEG_SPOP_SBC_1
0.0556
p.R721P
DO35376
PACA
ICGC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R721H
SIDM00781
Colorectal Carcinoma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R721H
SIDM01210
Glioblastoma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R721H
SIDM01612
Endometrial Carcinoma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R721H
SIDM00780
Colorectal Carcinoma
GDSC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R721H
SNU-C2B
large_intestine
COSMIC
VFTSS
DEG_SPOP_SBC_1
0.1667
p.R721H
KNS-81-FD
central_nervous_system
COSMIC
VFTSS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with WWC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08779
Keratin, type I cytoskeletal 16
DEG_SPOP_SBC_1
443:447
VFTSS
SPOP
0.9648
More...
Q2M1Z3
Rho GTPase-activating protein 31
DEG_SPOP_SBC_1
465:469
VFTSS
SPOP
0.8674
More...
Q9ULE0
Protein WWC3
DEG_SPOP_SBC_1
727:731
VFTSS
SPOP
0.9576
More...
A5PL33
Protein KRBA1
DEG_SPOP_SBC_1
573:577
VFTSS
SPOP
0.85
More...