DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VGTST
Uniprot ID:
Q9HBB8
Source protein:
Cadherin-related family member 5
Source gene:
CDHR5
Class:
DEG_SPOP_SBC_1
Location:
555:559
E3 ligase:
SPOP
DEGRON score:
0.7196
ASA_SCORE:
66.86
COIL:
0.634
CONS_SCORE:
0.4651
DSS_SCORE:
0.8841
HELIX:
0.0214
FCONS_SCORE:
0.8263
RIG_SCORE:
0.4958
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P550L
TCGA-B5-A3FA
UCEC
TCGA
VGTST
DEG_SPOP_SBC_1
0.1944
p.P550L
DO52402
UCEC
ICGC
VGTST
DEG_SPOP_SBC_1
0.1944
p.G556E
TCGA-FS-A1ZZ
SKCM
TCGA
VGTST
DEG_SPOP_SBC_1
0.6087
p.G556E
DO37412
SKCM
ICGC
VGTST
DEG_SPOP_SBC_1
0.6087
p.P550R
TCGA-KU-A66S
HNSC
TCGA
VGTST
DEG_SPOP_SBC_1
0.1944
p.P550R
DO44456
HNSC
ICGC
VGTST
DEG_SPOP_SBC_1
0.1944
p.Q562H
DO48381
BLCA
ICGC
VGTST
DEG_SPOP_SBC_1
0.25
p.S548A
DO230309
COCA
ICGC
VGTST
DEG_SPOP_SBC_1
0.1389
p.P552L
DO229346
LAML
ICGC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
DO230556
LUSC
ICGC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM01040
Ovarian Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM01005
Acute Myeloid Leukemia
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00287
B-Lymphoblastic Leukemia
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00235
Kidney Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00383
Gastric Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00292
Small Cell Lung Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00252
Biliary Tract Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM01653
Non-Cancerous
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00574
Glioblastoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00207
Glioblastoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00988
Kidney Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00494
Non-Small Cell Lung Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00986
Head and Neck Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00380
Acute Myeloid Leukemia
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM01033
Bladder Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00168
Head and Neck Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM01660
Kidney Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM01451
Pancreatic Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.P552L
SIDM00497
Colorectal Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.25
p.E552V
DO231610
LINC
ICGC
VGTST
DEG_SPOP_SBC_1
0.25
p.G554S
DO230545
LUSC
ICGC
VGTST
DEG_SPOP_SBC_1
0.3056
p.S567G
DO230545
LUSC
ICGC
VGTST
DEG_SPOP_SBC_1
0.1111
p.P548L
DO38404
STAD
ICGC
VGTST
DEG_SPOP_SBC_1
0.1389
p.S548P
DO229253
THCA
ICGC
VGTST
DEG_SPOP_SBC_1
0.1389
p.A551T
DO229253
THCA
ICGC
VGTST
DEG_SPOP_SBC_1
0.2222
p.P555H
DO229257
THCA
ICGC
VGTST
DEG_SPOP_SBC_1
0.7694
p.P553L
SIDM00477
Esophageal Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.2778
p.P553L
ACH-000383
Esophageal Cancer
CCLE
VGTST
DEG_SPOP_SBC_1
0.2778
p.P553L
OE33
oesophagus
COSMIC
VGTST
DEG_SPOP_SBC_1
0.2778
p.G546E
SIDM00856
Other Solid Cancers
GDSC
VGTST
DEG_SPOP_SBC_1
0.0833
p.G546E
ACH-000096
Rhabdoid
CCLE
VGTST
DEG_SPOP_SBC_1
0.0833
p.G546E
G-401
soft_tissue
COSMIC
VGTST
DEG_SPOP_SBC_1
0.0833
p.T565I
SIDM00282
Colorectal Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.1667
p.T565I
ACH-000998
Colon/Colorectal Cancer
CCLE
VGTST
DEG_SPOP_SBC_1
0.1667
p.T565I
CW-2
large_intestine
COSMIC
VGTST
DEG_SPOP_SBC_1
0.1667
p.T557S
SIDM00357
Small Cell Lung Carcinoma
GDSC
VGTST
DEG_SPOP_SBC_1
0.6005
p.T557S
ACH-002193
Lung Cancer
CCLE
VGTST
DEG_SPOP_SBC_1
0.6005
p.T557S
RERF-LC-FM
lung
COSMIC
VGTST
DEG_SPOP_SBC_1
0.6005
p.G569D
ACH-000431
Lung Cancer
CCLE
VGTST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with CDHR5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02505
Mucin-3A
DEG_SPOP_SBC_1
2497:2501
VGTST
SPOP
0.6282
More...
Q14315
Filamin-C
DEG_SPOP_SBC_1
1959:1963
VGTST
SPOP
0.9482
More...
Q8N2C7
Protein unc-80 homolog
DEG_SPOP_SBC_1
2924:2928
VGTST
SPOP
0.9987
More...
Q9HBB8
Cadherin-related family member 5
DEG_SPOP_SBC_1
555:559
VGTST
SPOP
0.7196
More...