DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VISTS
Uniprot ID:
Q8WUY3
Source protein:
Protein prune homolog 2
Source gene:
PRUNE2
Class:
DEG_SPOP_SBC_1
Location:
1680:1684
E3 ligase:
SPOP
DEGRON score:
0.8674
ASA_SCORE:
88.28
COIL:
0.891
CONS_SCORE:
0.4106
DSS_SCORE:
0.6886
HELIX:
0.0606
FCONS_SCORE:
1.0623
RIG_SCORE:
0.6739
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1693S
TCGA-AA-3864
COAD
TCGA
VISTS
DEG_SPOP_SBC_1
0.0833
p.D1690G
TCGA-CG-5728
STAD
TCGA
VISTS
DEG_SPOP_SBC_1
0.1667
p.S1687Y
TCGA-ER-A195
SKCM
TCGA
VISTS
DEG_SPOP_SBC_1
0.25
p.S1691N
TCGA-FR-A726
SKCM
TCGA
VISTS
DEG_SPOP_SBC_1
0.1389
p.S1679C
DO48583
BLCA
ICGC
VISTS
DEG_SPOP_SBC_1
0.3056
p.S1679C
DO2401
BRCA
ICGC
VISTS
DEG_SPOP_SBC_1
0.3056
p.P1691L
DO228948
LICA
ICGC
VISTS
DEG_SPOP_SBC_1
0.1389
p.G1673C
DO45299
LIRI
ICGC
VISTS
DEG_SPOP_SBC_1
0.1389
p.P1681L
DO23633
LUAD
ICGC
VISTS
DEG_SPOP_SBC_1
0.7582
p.D1677N
DO229459
SKCA
ICGC
VISTS
DEG_SPOP_SBC_1
0.25
p.D1677N
SIDM00937
Oral Cavity Carcinoma
GDSC
VISTS
DEG_SPOP_SBC_1
0.25
p.D1677N
KM12
large_intestine
COSMIC
VISTS
DEG_SPOP_SBC_1
0.25
p.P1691S
DO42033
UCEC
ICGC
VISTS
DEG_SPOP_SBC_1
0.1389
p.S1670Y
SIDM00656
Burkitt's Lymphoma
GDSC
VISTS
DEG_SPOP_SBC_1
0.5
p.S1670Y
ACH-000944
Lymphoma
CCLE
VISTS
DEG_SPOP_SBC_1
0.5
p.S1670Y
NAMALWA
haematopoietic_and_lymphoid_tissue
COSMIC
VISTS
DEG_SPOP_SBC_1
0.5
p.D1688N
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
VISTS
DEG_SPOP_SBC_1
0.2222
p.D1688N
ACH-000929
Lung Cancer
CCLE
VISTS
DEG_SPOP_SBC_1
0.2222
p.D1688N
NCI-H2110
lung
COSMIC
VISTS
DEG_SPOP_SBC_1
0.2222
p.S1684R
ACH-001751
Sarcoma
CCLE
VISTS
DEG_SPOP_SBC_1
0.7427
Drug responses associated with PRUNE2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VISTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16112
Aggrecan core protein
DEG_SPOP_SBC_1
2212:2216
VISTS
SPOP
0.6313
More...
P18583
Protein SON
DEG_SPOP_SBC_1
1642:1646
VISTS
SPOP
0.996
More...
Q8WUY3
Protein prune homolog 2
DEG_SPOP_SBC_1
1680:1684
VISTS
SPOP
0.8674
More...
Q9UPS8
Ankyrin repeat domain-containing protein 26
DEG_SPOP_SBC_1
1632:1636
VISTS
SPOP
0.8911
More...
Q96EK7
Constitutive coactivator of peroxisome proliferator-activated receptor gamma
DEG_SPOP_SBC_1
328:332
VISTS
SPOP
0.9894
More...