DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VISTS
Uniprot ID:
Q96EK7
Source protein:
Constitutive coactivator of peroxisome proliferator-activated receptor gamma
Source gene:
FAM120B
Class:
DEG_SPOP_SBC_1
Location:
328:332
E3 ligase:
SPOP
DEGRON score:
0.9894
ASA_SCORE:
71.72
COIL:
0.8452
CONS_SCORE:
0.4694
DSS_SCORE:
0.4639
HELIX:
0.053
FCONS_SCORE:
0.9461
RIG_SCORE:
0.7396
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S333L
TCGA-06-5416
GBM
TCGA
VISTS
DEG_SPOP_SBC_1
0.3056
p.S332I
TCGA-17-Z027
LUAD
TCGA
VISTS
DEG_SPOP_SBC_1
0.7341
p.D334Y
TCGA-19-5956
GBM
TCGA
VISTS
DEG_SPOP_SBC_1
0.2778
p.A335T
TCGA-4Z-AA82
BLCA
TCGA
VISTS
DEG_SPOP_SBC_1
0.25
p.S330Y
TCGA-A5-A0G2
UCEC
TCGA
VISTS
DEG_SPOP_SBC_1
0.712
p.A335V
TCGA-D1-A103
UCEC
TCGA
VISTS
DEG_SPOP_SBC_1
0.25
p.A335V
DO42312
UCEC
ICGC
VISTS
DEG_SPOP_SBC_1
0.25
p.E336K
TCGA-DF-A2KU
UCEC
TCGA
VISTS
DEG_SPOP_SBC_1
0.2222
p.P330H
DO234239
ESAD
ICGC
VISTS
DEG_SPOP_SBC_1
0.7694
p.P319S
DO44469
KIRP
ICGC
VISTS
DEG_SPOP_SBC_1
0.5278
p.S342Y
DO41235
UCEC
ICGC
VISTS
DEG_SPOP_SBC_1
0.0556
p.F337V
SIDM00980
Gastric Carcinoma
GDSC
VISTS
DEG_SPOP_SBC_1
0.1944
p.F337V
23132-87
stomach
COSMIC
VISTS
DEG_SPOP_SBC_1
0.1944
p.K326Q
ACH-000215
Brain Cancer
CCLE
VISTS
DEG_SPOP_SBC_1
0.7222
p.G332D
KYSE-510
oesophagus
COSMIC
VISTS
DEG_SPOP_SBC_1
0.7198
p.G332D
KALS-1
central_nervous_system
COSMIC
VISTS
DEG_SPOP_SBC_1
0.7198
p.G332D
no-10
central_nervous_system
COSMIC
VISTS
DEG_SPOP_SBC_1
0.7198
p.G320D
no-10
central_nervous_system
COSMIC
VISTS
DEG_SPOP_SBC_1
0.1111
p.G320D
KYSE-510
oesophagus
COSMIC
VISTS
DEG_SPOP_SBC_1
0.1111
p.G320D
KALS-1
central_nervous_system
COSMIC
VISTS
DEG_SPOP_SBC_1
0.1111
p.F326V
23132-87
stomach
COSMIC
VISTS
DEG_SPOP_SBC_1
0.7222
Drug responses associated with FAM120B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VISTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16112
Aggrecan core protein
DEG_SPOP_SBC_1
2212:2216
VISTS
SPOP
0.6313
More...
P18583
Protein SON
DEG_SPOP_SBC_1
1642:1646
VISTS
SPOP
0.996
More...
Q8WUY3
Protein prune homolog 2
DEG_SPOP_SBC_1
1680:1684
VISTS
SPOP
0.8674
More...
Q9UPS8
Ankyrin repeat domain-containing protein 26
DEG_SPOP_SBC_1
1632:1636
VISTS
SPOP
0.8911
More...
Q96EK7
Constitutive coactivator of peroxisome proliferator-activated receptor gamma
DEG_SPOP_SBC_1
328:332
VISTS
SPOP
0.9894
More...