DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKSTS
Uniprot ID:
O94964
Source protein:
Protein SOGA1
Source gene:
SOGA1
Class:
DEG_SPOP_SBC_1
Location:
1127:1131
E3 ligase:
SPOP
DEGRON score:
0.9469
ASA_SCORE:
90.1
COIL:
0.8584
CONS_SCORE:
0.4884
DSS_SCORE:
0.487
HELIX:
0.0966
FCONS_SCORE:
0.8151
RIG_SCORE:
0.7089
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1139C
TCGA-AA-A022
COAD
TCGA
VKSTS
DEG_SPOP_SBC_1
0.5556
p.R1139C
DO10647
COAD
ICGC
VKSTS
DEG_SPOP_SBC_1
0.5556
p.A1118S
DO233874
GACA
ICGC
VKSTS
DEG_SPOP_SBC_1
0.0833
p.A1118V
SIDM00251
Gastric Carcinoma
GDSC
VKSTS
DEG_SPOP_SBC_1
0.0833
p.A1118V
TGBC11TKB
stomach
COSMIC
VKSTS
DEG_SPOP_SBC_1
0.0833
p.R1119C
ACH-000930
Breast Cancer
CCLE
VKSTS
DEG_SPOP_SBC_1
0.1111
p.T1134M
ACH-000943
Colon/Colorectal Cancer
CCLE
VKSTS
DEG_SPOP_SBC_1
0.6944
Drug responses associated with SOGA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94964
Protein SOGA1
DEG_SPOP_SBC_1
1127:1131
VKSTS
SPOP
0.9469
More...
Q7Z6E9
E3 ubiquitin-protein ligase RBBP6
DEG_SPOP_SBC_1
80:84
VKSTS
SPOP
0.9745
More...
Q9Y462
Zinc finger protein 711
DEG_SPOP_SBC_1
196:200
VKSTS
SPOP
0.9584
More...
Q8N5R6
Coiled-coil domain-containing protein 33
DEG_SPOP_SBC_1
265:269
VKSTS
SPOP
0.7639
More...