DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VKTST
Uniprot ID:
O60293
Source protein:
Zinc finger C3H1 domain-containing protein
Source gene:
ZFC3H1
Class:
DEG_SPOP_SBC_1
Location:
411:415
E3 ligase:
SPOP
DEGRON score:
0.9877
ASA_SCORE:
107
COIL:
0.9268
CONS_SCORE:
0.4687
DSS_SCORE:
0.5551
HELIX:
0.0486
FCONS_SCORE:
1.0173
RIG_SCORE:
0.6852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S419L
TCGA-AP-A056
UCEC
TCGA
VKTST
DEG_SPOP_SBC_1
0.2222
p.S419L
DO43971
UCEC
ICGC
VKTST
DEG_SPOP_SBC_1
0.2222
p.Q409H
TCGA-P3-A6T5
HNSC
TCGA
VKTST
DEG_SPOP_SBC_1
0.2778
p.Q409H
DO49066
HNSC
ICGC
VKTST
DEG_SPOP_SBC_1
0.2778
p.S424N
DO230343
COCA
ICGC
VKTST
DEG_SPOP_SBC_1
0.0833
p.Q409K
DO228976
LICA
ICGC
VKTST
DEG_SPOP_SBC_1
0.2778
p.T404K
DO229036
LICA
ICGC
VKTST
DEG_SPOP_SBC_1
0.1389
p.V423G
SIDM01290
Esophageal Carcinoma
GDSC
VKTST
DEG_SPOP_SBC_1
0.1111
p.Q408H
SIDM00238
Ovarian Carcinoma
GDSC
VKTST
DEG_SPOP_SBC_1
0.25
p.Q408H
ACH-000947
Ovarian Cancer
CCLE
VKTST
DEG_SPOP_SBC_1
0.25
p.Q408H
OVK-18
ovary
COSMIC
VKTST
DEG_SPOP_SBC_1
0.25
p.T406I
SIDM00282
Colorectal Carcinoma
GDSC
VKTST
DEG_SPOP_SBC_1
0.1944
p.T406I
ACH-000998
Colon/Colorectal Cancer
CCLE
VKTST
DEG_SPOP_SBC_1
0.1944
p.T406I
CW-2
large_intestine
COSMIC
VKTST
DEG_SPOP_SBC_1
0.1944
p.K422E
SIDM01612
Endometrial Carcinoma
GDSC
VKTST
DEG_SPOP_SBC_1
0.25
Drug responses associated with ZFC3H1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4UGR9
Xin actin-binding repeat-containing protein 2
DEG_SPOP_SBC_1
1274:1278
VKTST
SPOP
0.9434
More...
O60293
Zinc finger C3H1 domain-containing protein
DEG_SPOP_SBC_1
411:415
VKTST
SPOP
0.9877
More...
Q8WWI1
LIM domain only protein 7
DEG_SPOP_SBC_1
1574:1578
VKTST
SPOP
0.975
More...
Q9H799
Ciliogenesis and planar polarity effector 1
DEG_SPOP_SBC_1
1777:1781
VKTST
SPOP
0.6764
More...