DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VKTST
Uniprot ID:
Q9H799
Source protein:
Ciliogenesis and planar polarity effector 1
Source gene:
CPLANE1
Class:
DEG_SPOP_SBC_1
Location:
1777:1781
E3 ligase:
SPOP
DEGRON score:
0.6764
ASA_SCORE:
76.02
COIL:
0.7914
CONS_SCORE:
0.3543
DSS_SCORE:
0.0689
HELIX:
0.0694
FCONS_SCORE:
0.7655
RIG_SCORE:
0.8466
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1778N
SIDM01006
Plasma Cell Myeloma
GDSC
VKTST
DEG_SPOP_SBC_1
0.5806
p.K1778N
KARPAS-620
haematopoietic_and_lymphoid_tissue
COSMIC
VKTST
DEG_SPOP_SBC_1
0.5806
p.V1777I
SIDM01021
Glioblastoma
GDSC
VKTST
DEG_SPOP_SBC_1
0.7076
p.V1777I
SIDM00539
Esophageal Carcinoma
GDSC
VKTST
DEG_SPOP_SBC_1
0.7076
p.V1777I
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
VKTST
DEG_SPOP_SBC_1
0.7076
Drug responses associated with CPLANE1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4UGR9
Xin actin-binding repeat-containing protein 2
DEG_SPOP_SBC_1
1274:1278
VKTST
SPOP
0.9434
More...
O60293
Zinc finger C3H1 domain-containing protein
DEG_SPOP_SBC_1
411:415
VKTST
SPOP
0.9877
More...
Q8WWI1
LIM domain only protein 7
DEG_SPOP_SBC_1
1574:1578
VKTST
SPOP
0.975
More...
Q9H799
Ciliogenesis and planar polarity effector 1
DEG_SPOP_SBC_1
1777:1781
VKTST
SPOP
0.6764
More...