DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VMSSS
Uniprot ID:
Q68DE3
Source protein:
Basic helix-loop-helix domain-containing protein USF3
Source gene:
USF3
Class:
DEG_SPOP_SBC_1
Location:
676:680
E3 ligase:
SPOP
DEGRON score:
0.9741
ASA_SCORE:
98.28
COIL:
0.9444
CONS_SCORE:
0.5605
DSS_SCORE:
0.534
HELIX:
0.014
FCONS_SCORE:
0.7957
RIG_SCORE:
0.6558
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S679P
SIDM00321
Ovarian Carcinoma
GDSC
VMSSS
DEG_SPOP_SBC_1
0.6752
p.S679P
TYK-nu
ovary
COSMIC
VMSSS
DEG_SPOP_SBC_1
0.6752
p.T686S
SIDM00845
Burkitt's Lymphoma
GDSC
VMSSS
DEG_SPOP_SBC_1
0.1667
p.T686S
SIDM00035
Thyroid Gland Carcinoma
GDSC
VMSSS
DEG_SPOP_SBC_1
0.1667
p.T686S
SIDM00461
Acute Myeloid Leukemia
GDSC
VMSSS
DEG_SPOP_SBC_1
0.1667
p.T686S
SIDM00946
T-Lymphoblastic Leukemia
GDSC
VMSSS
DEG_SPOP_SBC_1
0.1667
p.T686S
SIDM01519
Head and Neck Carcinoma
GDSC
VMSSS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with USF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49848
Transcription initiation factor TFIID subunit 6
DEG_SPOP_SBC_1
540:544
VMSSS
SPOP
0.9875
More...
Q68DE3
Basic helix-loop-helix domain-containing protein USF3
DEG_SPOP_SBC_1
676:680
VMSSS
SPOP
0.9741
More...
Q8NF50
Dedicator of cytokinesis protein 8
DEG_SPOP_SBC_1
900:904
VMSSS
SPOP
0.99
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
239:243
VMSSS
SPOP
0.5358
More...