DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VMSSS
Uniprot ID:
Q8NF50
Source protein:
Dedicator of cytokinesis protein 8
Source gene:
DOCK8
Class:
DEG_SPOP_SBC_1
Location:
900:904
E3 ligase:
SPOP
DEGRON score:
0.99
ASA_SCORE:
64.1
COIL:
0.5694
CONS_SCORE:
0.2836
DSS_SCORE:
0.4489
HELIX:
0.3926
FCONS_SCORE:
1.0597
RIG_SCORE:
0.6779
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S893T
TCGA-52-7809
LUSC
TCGA
VMSSS
DEG_SPOP_SBC_1
0.1389
p.M901V
TCGA-AX-A05Y
UCEC
TCGA
VMSSS
DEG_SPOP_SBC_1
0.6097
p.D907Y
TCGA-AZ-6598
COAD
TCGA
VMSSS
DEG_SPOP_SBC_1
0.25
p.D907N
TCGA-BF-A1Q0
SKCM
TCGA
VMSSS
DEG_SPOP_SBC_1
0.25
p.H912N
TCGA-CG-5721
STAD
TCGA
VMSSS
DEG_SPOP_SBC_1
0.1111
p.A909T
TCGA-CV-7413
HNSC
TCGA
VMSSS
DEG_SPOP_SBC_1
0.1944
p.R899Q
TCGA-EY-A215
UCEC
TCGA
VMSSS
DEG_SPOP_SBC_1
0.3056
p.A909V
TCGA-EY-A549
UCEC
TCGA
VMSSS
DEG_SPOP_SBC_1
0.1944
p.S913Y
TCGA-FS-A1Z0
SKCM
TCGA
VMSSS
DEG_SPOP_SBC_1
0.0833
p.R908W
DO1015
BRCA
ICGC
VMSSS
DEG_SPOP_SBC_1
0.2222
p.R908W
DO218861
SKCA
ICGC
VMSSS
DEG_SPOP_SBC_1
0.2222
p.M894I
DO229018
LICA
ICGC
VMSSS
DEG_SPOP_SBC_1
0.6111
p.A895S
DO229038
LICA
ICGC
VMSSS
DEG_SPOP_SBC_1
0.1944
p.H899D
DO48478
LIHC
ICGC
VMSSS
DEG_SPOP_SBC_1
0.3056
p.M901T
DO23915
LUAD
ICGC
VMSSS
DEG_SPOP_SBC_1
0.6312
p.R911H
DO49460
PACA
ICGC
VMSSS
DEG_SPOP_SBC_1
0.1389
p.V898I
DO41331
UCEC
ICGC
VMSSS
DEG_SPOP_SBC_1
0.2778
p.D914N
ACH-001669
Leukemia
CCLE
VMSSS
DEG_SPOP_SBC_1
0.0556
p.L905M
CW-2
large_intestine
COSMIC
VMSSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with DOCK8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49848
Transcription initiation factor TFIID subunit 6
DEG_SPOP_SBC_1
540:544
VMSSS
SPOP
0.9875
More...
Q68DE3
Basic helix-loop-helix domain-containing protein USF3
DEG_SPOP_SBC_1
676:680
VMSSS
SPOP
0.9741
More...
Q8NF50
Dedicator of cytokinesis protein 8
DEG_SPOP_SBC_1
900:904
VMSSS
SPOP
0.99
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
239:243
VMSSS
SPOP
0.5358
More...