DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
VMSSS
Uniprot ID:
Q9H0E3
Source protein:
Histone deacetylase complex subunit SAP130
Source gene:
SAP130
Class:
DEG_SPOP_SBC_1
Location:
239:243
E3 ligase:
SPOP
DEGRON score:
0.5358
ASA_SCORE:
92.36
COIL:
0.9118
CONS_SCORE:
0.513
DSS_SCORE:
0.3626
HELIX:
0.0462
FCONS_SCORE:
0.9847
RIG_SCORE:
0.6904
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I243L
ACH-001560
Lung Cancer
CCLE
VMSSS
DEG_SPOP_SBC_1
0.7174
p.A237V
TCGA-DI-A1BU
UCEC
TCGA
VMSSS
DEG_SPOP_SBC_1
0.2778
p.A237V
DO42023
UCEC
ICGC
VMSSS
DEG_SPOP_SBC_1
0.2778
p.A235V
ACH-000989
Colon/Colorectal Cancer
CCLE
VMSSS
DEG_SPOP_SBC_1
0.2222
p.A235V
SNU-175
large_intestine
COSMIC
VMSSS
DEG_SPOP_SBC_1
0.2222
p.G233C
TCGA-EE-A183
SKCM
TCGA
VMSSS
DEG_SPOP_SBC_1
0.1667
p.G233C
DO37715
SKCM
ICGC
VMSSS
DEG_SPOP_SBC_1
0.1667
p.R232Q
TCGA-AP-A056
UCEC
TCGA
VMSSS
DEG_SPOP_SBC_1
0.1389
p.R232Q
DO43971
UCEC
ICGC
VMSSS
DEG_SPOP_SBC_1
0.1389
p.R250W
ACH-002097
Skin Cancer
CCLE
VMSSS
DEG_SPOP_SBC_1
0.1389
p.R250W
CP66-MEL
skin
COSMIC
VMSSS
DEG_SPOP_SBC_1
0.1389
p.H229Y
SIDM00216
Colorectal Carcinoma
GDSC
VMSSS
DEG_SPOP_SBC_1
0.0556
Showing 1 to 12 of 12 entries
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Drug responses associated with SAP130 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VMSSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q68DE3
Basic helix-loop-helix domain-containing protein USF3
DEG_SPOP_SBC_1
676:680
VMSSS
SPOP
0.9741
More...
Q8NF50
Dedicator of cytokinesis protein 8
DEG_SPOP_SBC_1
900:904
VMSSS
SPOP
0.99
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
239:243
VMSSS
SPOP
0.5358
More...
P49848
Transcription initiation factor TFIID subunit 6
DEG_SPOP_SBC_1
540:544
VMSSS
SPOP
0.9875
More...
Showing 1 to 4 of 4 entries
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