DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VNSTT
Uniprot ID:
P07996
Source protein:
Thrombospondin-1
Source gene:
THBS1
Class:
DEG_SPOP_SBC_1
Location:
1066:1070
E3 ligase:
SPOP
DEGRON score:
0.7365
ASA_SCORE:
54.4
COIL:
0.7318
CONS_SCORE:
0.8568
DSS_SCORE:
0.4414
HELIX:
0.0086
FCONS_SCORE:
1.1337
RIG_SCORE:
0.6971
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1072T
TCGA-36-2533
OV
TCGA
VNSTT
DEG_SPOP_SBC_1
0.2778
p.P1072T
DO32516
OV
ICGC
VNSTT
DEG_SPOP_SBC_1
0.2778
p.R1077W
TCGA-A5-A0VQ
UCEC
TCGA
VNSTT
DEG_SPOP_SBC_1
0.1389
p.R1077W
TCGA-AN-A0AK
BRCA
TCGA
VNSTT
DEG_SPOP_SBC_1
0.1389
p.R1077W
TCGA-G4-6309
COAD
TCGA
VNSTT
DEG_SPOP_SBC_1
0.1389
p.R1077W
DO1608
BRCA
ICGC
VNSTT
DEG_SPOP_SBC_1
0.1389
p.R1077W
DO7810
COAD
ICGC
VNSTT
DEG_SPOP_SBC_1
0.1389
p.R1077W
DO42113
UCEC
ICGC
VNSTT
DEG_SPOP_SBC_1
0.1389
p.P1072H
TCGA-AA-3949
COAD
TCGA
VNSTT
DEG_SPOP_SBC_1
0.2778
p.P1072H
DO7798
COAD
ICGC
VNSTT
DEG_SPOP_SBC_1
0.2778
p.A1079T
TCGA-CG-5725
STAD
TCGA
VNSTT
DEG_SPOP_SBC_1
0.0833
p.A1079T
DO38191
STAD
ICGC
VNSTT
DEG_SPOP_SBC_1
0.0833
p.G1057E
TCGA-D3-A51R
SKCM
TCGA
VNSTT
DEG_SPOP_SBC_1
0.0833
p.G1057E
DO47480
SKCM
ICGC
VNSTT
DEG_SPOP_SBC_1
0.0833
p.R1077Q
TCGA-DX-A6BF
SARC
TCGA
VNSTT
DEG_SPOP_SBC_1
0.1389
p.R1077Q
DO219998
SARC
ICGC
VNSTT
DEG_SPOP_SBC_1
0.1389
p.L1061P
TCGA-IZ-8195
KIRP
TCGA
VNSTT
DEG_SPOP_SBC_1
0.1944
p.L1061P
DO44471
KIRP
ICGC
VNSTT
DEG_SPOP_SBC_1
0.1944
p.G1060S
DO220852
MELA
ICGC
VNSTT
DEG_SPOP_SBC_1
0.1667
p.E1074K
ACH-000687
Lymphoma
CCLE
VNSTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with THBS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07996
Thrombospondin-1
DEG_SPOP_SBC_1
1066:1070
VNSTT
SPOP
0.7365
More...
P35442
Thrombospondin-2
DEG_SPOP_SBC_1
1068:1072
VNSTT
SPOP
0.7159
More...
Q2KHM9
Protein moonraker
DEG_SPOP_SBC_1
698:702
VNSTT
SPOP
0.9076
More...
Q9P267
Methyl-CpG-binding domain protein 5
DEG_SPOP_SBC_1
1108:1112
VNSTT
SPOP
0.5045
More...
Q9Y4B6
DDB1- and CUL4-associated factor 1
DEG_SPOP_SBC_1
253:257
VNSTT
SPOP
0.9891
More...