DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTTT
Uniprot ID:
Q96D05
Source protein:
Protein FAM241B
Source gene:
FAM241B
Class:
DEG_SPOP_SBC_1
Location:
18:22
E3 ligase:
SPOP
DEGRON score:
0.7851
ASA_SCORE:
80.12
COIL:
0.7162
CONS_SCORE:
0.5792
DSS_SCORE:
0.7788
HELIX:
0.2396
FCONS_SCORE:
0.8011
RIG_SCORE:
0.715
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T21A
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
VRTTT
DEG_SPOP_SBC_1
0.7139
p.T21A
SIDM00667
Other Sarcomas
GDSC
VRTTT
DEG_SPOP_SBC_1
0.7139
p.D15N
SIDM00319
Melanoma
GDSC
VRTTT
DEG_SPOP_SBC_1
0.25
p.D15N
VMRC-MELG
skin
COSMIC
VRTTT
DEG_SPOP_SBC_1
0.25
p.R31G
SIDM00481
Ovarian Carcinoma
GDSC
VRTTT
DEG_SPOP_SBC_1
0.0833
p.R31G
OAW-28
ovary
COSMIC
VRTTT
DEG_SPOP_SBC_1
0.0833
Drug responses associated with FAM241B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1491:1495
VRTTT
SPOP
0.9899
More...
Q96D05
Protein FAM241B
DEG_SPOP_SBC_1
18:22
VRTTT
SPOP
0.7851
More...
Q9NRF2
SH2B adapter protein 1
DEG_SPOP_SBC_1
329:333
VRTTT
SPOP
0.6499
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
178:182
VRTTT
SPOP
0.7256
More...
Q96KF7
Small integral membrane protein 8
DEG_SPOP_SBC_1
28:32
VRTTT
SPOP
0.6411
More...