DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VVTTT
Uniprot ID:
P05187
Source protein:
Alkaline phosphatase, placental type
Source gene:
ALPP
Class:
DEG_SPOP_SBC_1
Location:
167:171
E3 ligase:
SPOP
DEGRON score:
0.7745
ASA_SCORE:
31.94
COIL:
0.2586
CONS_SCORE:
0.7725
DSS_SCORE:
0.4779
HELIX:
0.0106
FCONS_SCORE:
1.0568
RIG_SCORE:
0.8023
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G162V
TCGA-05-4396
LUAD
TCGA
VVTTT
DEG_SPOP_SBC_1
0.1944
p.G162V
DO23838
LUAD
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1944
p.V173M
TCGA-2A-A8VT
PRAD
TCGA
VVTTT
DEG_SPOP_SBC_1
0.2778
p.V173M
DO219240
PRAD
ICGC
VVTTT
DEG_SPOP_SBC_1
0.2778
p.T169I
TCGA-55-8299
LUAD
TCGA
VVTTT
DEG_SPOP_SBC_1
0.7078
p.T169I
DO25927
LUAD
ICGC
VVTTT
DEG_SPOP_SBC_1
0.7078
p.V165A
TCGA-94-8490
LUSC
TCGA
VVTTT
DEG_SPOP_SBC_1
0.2778
p.V165A
DO52021
LUSC
ICGC
VVTTT
DEG_SPOP_SBC_1
0.2778
p.A179T
TCGA-A6-A565
COAD
TCGA
VVTTT
DEG_SPOP_SBC_1
0.1111
p.A179T
DO44090
COAD
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1111
p.A179T
DO50970
LICA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1111
p.G180D
TCGA-D5-6922
COAD
TCGA
VVTTT
DEG_SPOP_SBC_1
0.0833
p.G180D
DO8714
COAD
ICGC
VVTTT
DEG_SPOP_SBC_1
0.0833
p.P178L
TCGA-EB-A5FP
SKCM
TCGA
VVTTT
DEG_SPOP_SBC_1
0.1389
p.P178L
DO47362
SKCM
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1389
p.S177L
TCGA-EK-A2RA
CESC
TCGA
VVTTT
DEG_SPOP_SBC_1
0.6111
p.S177L
TCGA-YC-A89H
BLCA
TCGA
VVTTT
DEG_SPOP_SBC_1
0.6111
p.S177L
DO51948
BLCA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.6111
p.S177L
DO51601
CESC
ICGC
VVTTT
DEG_SPOP_SBC_1
0.6111
p.G166R
TCGA-FW-A3R5
SKCM
TCGA
VVTTT
DEG_SPOP_SBC_1
0.3056
p.G166R
DO37406
SKCM
ICGC
VVTTT
DEG_SPOP_SBC_1
0.3056
p.P178S
DO225286
BRCA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1389
p.P178S
DO227593
BRCA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1389
p.K159N
DO229041
LICA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.2222
p.A179G
DO231801
LINC
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1111
p.T181A
DO52365
LUSC
ICGC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
DO222708
MELA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
SIDM00486
Squamous Cell Lung Carcinoma
GDSC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
SIDM01146
Gastric Carcinoma
GDSC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
SIDM00242
Osteosarcoma
GDSC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
SIDM01451
Pancreatic Carcinoma
GDSC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
SIDM01756
Chronic Myelogenous Leukemia
GDSC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
ACH-000076
Leukemia
CCLE
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
ACH-000932
Gastric Cancer
CCLE
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
ACH-000933
Pancreatic Cancer
CCLE
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
ACH-001664
Gastric Cancer
CCLE
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
ACH-002067
Bone Cancer
CCLE
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
NCI-SNU-1
stomach
COSMIC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T181A
NOS-1
bone
COSMIC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.G180R
DO229259
THCA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.0833
p.G162R
SIDM01228
Melanoma
GDSC
VVTTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with ALPP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1642:1646
VVTTT
SPOP
0.908
More...
P05187
Alkaline phosphatase, placental type
DEG_SPOP_SBC_1
167:171
VVTTT
SPOP
0.7745
More...
P09923
Intestinal-type alkaline phosphatase
DEG_SPOP_SBC_1
164:168
VVTTT
SPOP
0.7745
More...
Q9ULC0
Endomucin
DEG_SPOP_SBC_1
32:36
VVTTT
SPOP
0.977
More...