DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VVTTT
Uniprot ID:
Q9ULC0
Source protein:
Endomucin
Source gene:
EMCN
Class:
DEG_SPOP_SBC_1
Location:
32:36
E3 ligase:
SPOP
DEGRON score:
0.977
ASA_SCORE:
90.18
COIL:
0.7904
CONS_SCORE:
0.5469
DSS_SCORE:
0.3498
HELIX:
0.0162
FCONS_SCORE:
1.4728
RIG_SCORE:
0.8034
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G22C
TCGA-43-5668
LUSC
TCGA
VVTTT
DEG_SPOP_SBC_1
0.0556
p.G22C
DO26608
LUSC
ICGC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.S39Y
TCGA-AX-A2HC
UCEC
TCGA
VVTTT
DEG_SPOP_SBC_1
0.25
p.S39Y
DO41572
UCEC
ICGC
VVTTT
DEG_SPOP_SBC_1
0.25
p.P43Q
TCGA-EE-A20F
SKCM
TCGA
VVTTT
DEG_SPOP_SBC_1
0.1389
p.P43Q
DO37961
SKCM
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1389
p.A26V
TCGA-F5-6812
READ
TCGA
VVTTT
DEG_SPOP_SBC_1
0.1667
p.A26V
DO36423
READ
ICGC
VVTTT
DEG_SPOP_SBC_1
0.1667
p.E46K
TCGA-QB-AA9O
SKCM
TCGA
VVTTT
DEG_SPOP_SBC_1
0.0556
p.E46K
DO51267
SKCM
ICGC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.N29D
DO227987
COCA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.25
p.G22D
DO222647
MELA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.0556
p.T35A
DO232829
NACA
ICGC
VVTTT
DEG_SPOP_SBC_1
0.7139
p.L24V
SIDM02059
Colorectal Carcinoma
GDSC
VVTTT
DEG_SPOP_SBC_1
0.1111
p.V33I
SIDM01219
Non-Small Cell Lung Carcinoma
GDSC
VVTTT
DEG_SPOP_SBC_1
0.5965
p.V33I
SIDM00498
Colorectal Carcinoma
GDSC
VVTTT
DEG_SPOP_SBC_1
0.5965
Drug responses associated with EMCN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1642:1646
VVTTT
SPOP
0.908
More...
P05187
Alkaline phosphatase, placental type
DEG_SPOP_SBC_1
167:171
VVTTT
SPOP
0.7745
More...
P09923
Intestinal-type alkaline phosphatase
DEG_SPOP_SBC_1
164:168
VVTTT
SPOP
0.7745
More...
Q9ULC0
Endomucin
DEG_SPOP_SBC_1
32:36
VVTTT
SPOP
0.977
More...