DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AETTT
Uniprot ID:
Q13129
Source protein:
Zinc finger protein Rlf
Source gene:
RLF
Class:
DEG_SPOP_SBC_1
Location:
1849:1853
E3 ligase:
SPOP
DEGRON score:
0.6364
ASA_SCORE:
78.94
COIL:
0.8048
CONS_SCORE:
0.598
DSS_SCORE:
0.2361
HELIX:
0.1528
FCONS_SCORE:
0.8105
RIG_SCORE:
0.8285
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1845S
SIDM01314
Colorectal Carcinoma
GDSC
AETTT
DEG_SPOP_SBC_1
0.2222
p.R1861G
SIDM00373
Endometrial Carcinoma
GDSC
AETTT
DEG_SPOP_SBC_1
0.1111
p.R1861G
ACH-000974
Endometrial/Uterine Cancer
CCLE
AETTT
DEG_SPOP_SBC_1
0.1111
p.T1853A
SIDM00524
Small Cell Lung Carcinoma
GDSC
AETTT
DEG_SPOP_SBC_1
0.7139
p.P1844S
SIDM00290
Gastric Carcinoma
GDSC
AETTT
DEG_SPOP_SBC_1
0.1944
p.P1844S
ACH-000847
Gastric Cancer
CCLE
AETTT
DEG_SPOP_SBC_1
0.1944
p.P1844S
HGC-27
stomach
COSMIC
AETTT
DEG_SPOP_SBC_1
0.1944
p.L1860M
SIDM01025
Esophageal Squamous Cell Carcinoma
GDSC
AETTT
DEG_SPOP_SBC_1
0.1389
p.L1860M
ACH-000637
Esophageal Cancer
CCLE
AETTT
DEG_SPOP_SBC_1
0.1389
p.L1860M
KYSE-520
oesophagus
COSMIC
AETTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with RLF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AETTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13129
Zinc finger protein Rlf
DEG_SPOP_SBC_1
1849:1853
AETTT
SPOP
0.6364
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7429:7433
AETTT
SPOP
0.7185
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7719:7723
AETTT
SPOP
0.9434
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
335:339
AETTT
SPOP
0.9978
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_SPOP_SBC_1
1455:1459
AETTT
SPOP
0.7738
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
823:827
AETTT
SPOP
0.55
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
268:272
AETTT
SPOP
0.6592
More...