DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AHTSS
Uniprot ID:
Q5TH69
Source protein:
Brefeldin A-inhibited guanine nucleotide-exchange protein 3
Source gene:
ARFGEF3
Class:
DEG_SPOP_SBC_1
Location:
280:284
E3 ligase:
SPOP
DEGRON score:
0.532
ASA_SCORE:
79.32
COIL:
0.8434
CONS_SCORE:
0.3246
DSS_SCORE:
0.4944
HELIX:
0.0974
FCONS_SCORE:
0.9223
RIG_SCORE:
0.6763
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S291L
SIDM00860
Head and Neck Carcinoma
GDSC
AHTSS
DEG_SPOP_SBC_1
0.1389
p.S291L
FADU
upper_aerodigestive_tract
COSMIC
AHTSS
DEG_SPOP_SBC_1
0.1389
p.P271S
SIDM00719
Small Cell Lung Carcinoma
GDSC
AHTSS
DEG_SPOP_SBC_1
0.0833
p.P271S
NCI-H345
lung
COSMIC
AHTSS
DEG_SPOP_SBC_1
0.0833
p.D274E
SIDM00094
Kidney Carcinoma
GDSC
AHTSS
DEG_SPOP_SBC_1
0.1667
p.D274E
SN12C
kidney
COSMIC
AHTSS
DEG_SPOP_SBC_1
0.1667
p.T276S
SIDM00168
Head and Neck Carcinoma
GDSC
AHTSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with ARFGEF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AHTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55197
Protein AF-10
DEG_SPOP_SBC_1
299:303
AHTSS
SPOP
0.9984
More...
Q5TH69
Brefeldin A-inhibited guanine nucleotide-exchange protein 3
DEG_SPOP_SBC_1
280:284
AHTSS
SPOP
0.532
More...
Q9C0C7
Activating molecule in BECN1-regulated autophagy protein 1
DEG_SPOP_SBC_1
1201:1205
AHTSS
SPOP
0.9814
More...
Q9Y6Y8
SEC23-interacting protein
DEG_SPOP_SBC_1
891:895
AHTSS
SPOP
0.9839
More...
Q8N9H9
Uncharacterized protein C1orf127
DEG_SPOP_SBC_1
583:587
AHTSS
SPOP
0.9833
More...