DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AKSST
Uniprot ID:
Q6WKZ4
Source protein:
Rab11 family-interacting protein 1
Source gene:
RAB11FIP1
Class:
DEG_SPOP_SBC_1
Location:
989:993
E3 ligase:
SPOP
DEGRON score:
0.7562
ASA_SCORE:
89.62
COIL:
0.8546
CONS_SCORE:
0.2544
DSS_SCORE:
0.5624
HELIX:
0.0956
FCONS_SCORE:
0.9564
RIG_SCORE:
0.7185
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D984G
TCGA-73-A9RS
LUAD
TCGA
AKSST
DEG_SPOP_SBC_1
0.1944
p.D984G
DO51193
LUAD
ICGC
AKSST
DEG_SPOP_SBC_1
0.1944
p.Q981H
TCGA-A5-A0GA
UCEC
TCGA
AKSST
DEG_SPOP_SBC_1
0.1111
p.Q981H
DO43763
UCEC
ICGC
AKSST
DEG_SPOP_SBC_1
0.1111
p.S991L
TCGA-AJ-A3EK
UCEC
TCGA
AKSST
DEG_SPOP_SBC_1
0.7667
p.S991L
DO41584
UCEC
ICGC
AKSST
DEG_SPOP_SBC_1
0.7667
p.G1002D
DO52679
MALY
ICGC
AKSST
DEG_SPOP_SBC_1
0.0833
p.S1000P
DO232224
PBCA
ICGC
AKSST
DEG_SPOP_SBC_1
0.1389
Drug responses associated with RAB11FIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AKSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94885
SAM and SH3 domain-containing protein 1
DEG_SPOP_SBC_1
747:751
AKSST
SPOP
0.7998
More...
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SPOP_SBC_1
659:663
AKSST
SPOP
0.9985
More...
Q6WKZ4
Rab11 family-interacting protein 1
DEG_SPOP_SBC_1
989:993
AKSST
SPOP
0.7562
More...
Q9Y2R2
Tyrosine-protein phosphatase non-receptor type 22
DEG_SPOP_SBC_1
372:376
AKSST
SPOP
0.8922
More...
Q5SZJ8
BEN domain-containing protein 6
DEG_SPOP_SBC_1
214:218
AKSST
SPOP
0.9533
More...