DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
DKENS
Uniprot ID:
Q5UIP0
Source protein:
Telomere-associated protein RIF1
Source gene:
RIF1
Class:
DEG_APCC_KENBOX_2
Location:
1433:1437
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9624
ASA_SCORE:
107.12
COIL:
0.6376
CONS_SCORE:
0.3293
DSS_SCORE:
0.7225
HELIX:
0.3528
FCONS_SCORE:
1.0758
RIG_SCORE:
0.5704
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1444H
TCGA-16-0848
GBM
TCGA
DKENS
DEG_APCC_KENBOX_2
0.1389
p.R1444H
DO12196
GBM
ICGC
DKENS
DEG_APCC_KENBOX_2
0.1389
p.S1431N
TCGA-73-4668
LUAD
TCGA
DKENS
DEG_APCC_KENBOX_2
0.7222
p.S1431N
DO23961
LUAD
ICGC
DKENS
DEG_APCC_KENBOX_2
0.7222
p.N1436T
TCGA-B5-A11E
UCEC
TCGA
DKENS
DEG_APCC_KENBOX_2
0.7055
p.N1436T
DO41644
UCEC
ICGC
DKENS
DEG_APCC_KENBOX_2
0.7055
p.D1433Y
TCGA-BR-4256
STAD
TCGA
DKENS
DEG_APCC_KENBOX_2
0.6214
p.D1433Y
DO38743
STAD
ICGC
DKENS
DEG_APCC_KENBOX_2
0.6214
p.D1433H
DO224905
BRCA
ICGC
DKENS
DEG_APCC_KENBOX_2
0.6577
p.R1444G
DO50403
ESAD
ICGC
DKENS
DEG_APCC_KENBOX_2
0.1389
p.R1443L
DO229025
LICA
ICGC
DKENS
DEG_APCC_KENBOX_2
0.1667
p.K1445N
SIDM01963
Colorectal Carcinoma
GDSC
DKENS
DEG_APCC_KENBOX_2
0.2222
p.E1430G
SIDM01090
Colorectal Carcinoma
GDSC
DKENS
DEG_APCC_KENBOX_2
0.25
p.E1430G
ACH-000943
Colon/Colorectal Cancer
CCLE
DKENS
DEG_APCC_KENBOX_2
0.25
p.E1430G
RKO
large_intestine
COSMIC
DKENS
DEG_APCC_KENBOX_2
0.25
Drug responses associated with RIF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48736
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
DEG_APCC_KENBOX_2
509:513
DKENS
APC,CDC20,FZR1
0.5073
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_APCC_KENBOX_2
1433:1437
DKENS
APC,CDC20,FZR1
0.9624
More...
Q9UIG0
Tyrosine-protein kinase BAZ1B
DEG_APCC_KENBOX_2
162:166
DKENS
APC,CDC20,FZR1
0.9945
More...
Q7RTY8
Transmembrane protease serine 7
DEG_APCC_KENBOX_2
2:6
DKENS
APC,CDC20,FZR1
0.6245
More...
Q5JPF3
Ankyrin repeat domain-containing protein 36C
DEG_APCC_KENBOX_2
966:970
DKENS
APC,CDC20,FZR1
0.998
More...
Q8N323
NXPE family member 1
DEG_APCC_KENBOX_2
270:274
DKENS
APC,CDC20,FZR1
0.9694
More...