DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GKENS
Uniprot ID:
P27448
Source protein:
MAP/microtubule affinity-regulating kinase 3
Source gene:
MARK3
Class:
DEG_APCC_KENBOX_2
Location:
525:529
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6336
ASA_SCORE:
95.76
COIL:
0.8976
CONS_SCORE:
0.2824
DSS_SCORE:
0.6749
HELIX:
0.0482
FCONS_SCORE:
0.9586
RIG_SCORE:
0.6465
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A539S
DO228952
LICA
ICGC
GKENS
DEG_APCC_KENBOX_2
0.0556
p.A516T
SIDM00557
Neuroblastoma
GDSC
GKENS
DEG_APCC_KENBOX_2
0.0833
p.A516T
ACH-000345
Neuroblastoma
CCLE
GKENS
DEG_APCC_KENBOX_2
0.0833
p.A516T
KP-N-RT-BM-1
autonomic_ganglia
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.0833
p.A539T
KP-N-RT-BM-1
autonomic_ganglia
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.0556
p.S522A
MDA-MB-468
breast
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.25
Drug responses associated with MARK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P27448
MAP/microtubule affinity-regulating kinase 3
DEG_APCC_KENBOX_2
525:529
GKENS
APC,CDC20,FZR1
0.6336
More...
Q4KWH8
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
DEG_APCC_KENBOX_2
994:998
GKENS
APC,CDC20,FZR1
0.6486
More...
Q8TCG5
Carnitine O-palmitoyltransferase 1, brain isoform
DEG_APCC_KENBOX_2
776:780
GKENS
APC,CDC20,FZR1
0.5545
More...
Q9NZJ0
Denticleless protein homolog
DEG_APCC_KENBOX_2
651:655
GKENS
APC,CDC20,FZR1
0.9981
More...
Q96T92
Insulinoma-associated protein 2
DEG_APCC_KENBOX_2
353:357
GKENS
APC,CDC20,FZR1
0.8158
More...