DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
GKENS
Uniprot ID:
Q8TCG5
Source protein:
Carnitine O-palmitoyltransferase 1, brain isoform
Source gene:
CPT1C
Class:
DEG_APCC_KENBOX_2
Location:
776:780
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5545
ASA_SCORE:
95.28
COIL:
0.8216
CONS_SCORE:
0.3648
DSS_SCORE:
0.48
HELIX:
0.1388
FCONS_SCORE:
0.9833
RIG_SCORE:
0.6172
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H767N
TCGA-AX-A2HC
UCEC
TCGA
GKENS
DEG_APCC_KENBOX_2
0.0833
p.H767N
DO41572
UCEC
ICGC
GKENS
DEG_APCC_KENBOX_2
0.0833
p.E778V
TCGA-BB-7870
HNSC
TCGA
GKENS
DEG_APCC_KENBOX_2
0.7693
p.E778V
DO14378
HNSC
ICGC
GKENS
DEG_APCC_KENBOX_2
0.7693
p.R770H
TCGA-D3-A1Q5
SKCM
TCGA
GKENS
DEG_APCC_KENBOX_2
0.1667
p.R770H
DO37827
SKCM
ICGC
GKENS
DEG_APCC_KENBOX_2
0.1667
p.E778K
TCGA-GN-A265
SKCM
TCGA
GKENS
DEG_APCC_KENBOX_2
0.7022
p.E778K
DO37491
SKCM
ICGC
GKENS
DEG_APCC_KENBOX_2
0.7022
p.R770C
TCGA-VQ-A8PB
STAD
TCGA
GKENS
DEG_APCC_KENBOX_2
0.1667
p.R770C
DO51766
STAD
ICGC
GKENS
DEG_APCC_KENBOX_2
0.1667
p.E778D
DO222884
COCA
ICGC
GKENS
DEG_APCC_KENBOX_2
0.6758
p.E778D
SIDM01141
Ovarian Carcinoma
GDSC
GKENS
DEG_APCC_KENBOX_2
0.6758
p.E778D
SIDM00684
Glioblastoma
GDSC
GKENS
DEG_APCC_KENBOX_2
0.6758
p.E778D
LN-229
central_nervous_system
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.6758
p.E778D
OV-90
ovary
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.6758
p.G776E
DO229036
LICA
ICGC
GKENS
DEG_APCC_KENBOX_2
0.6087
p.G776E
DO218861
SKCA
ICGC
GKENS
DEG_APCC_KENBOX_2
0.6087
p.G776W
DO229038
LICA
ICGC
GKENS
DEG_APCC_KENBOX_2
0.6714
p.R789C
DO23551
LIRI
ICGC
GKENS
DEG_APCC_KENBOX_2
0.0833
p.F772I
DO51517
PACA
ICGC
GKENS
DEG_APCC_KENBOX_2
0.2222
p.Q766L
SIDM01119
Other Solid Cancers
GDSC
GKENS
DEG_APCC_KENBOX_2
0.0556
p.Q766L
ACH-000775
Lung Cancer
CCLE
GKENS
DEG_APCC_KENBOX_2
0.0556
p.Q766L
NCI-H727
lung
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.0556
p.S775P
SIDM00214
Colorectal Carcinoma
GDSC
GKENS
DEG_APCC_KENBOX_2
0.3056
p.S775P
ACH-000955
Colon/Colorectal Cancer
CCLE
GKENS
DEG_APCC_KENBOX_2
0.3056
p.S775P
SNU-407
large_intestine
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.3056
p.G774V
ACH-000229
Non-Cancerous
CCLE
GKENS
DEG_APCC_KENBOX_2
0.2778
p.E767D
LN-229
central_nervous_system
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.0833
p.E767D
OV-90
ovary
COSMIC
GKENS
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with CPT1C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P27448
MAP/microtubule affinity-regulating kinase 3
DEG_APCC_KENBOX_2
525:529
GKENS
APC,CDC20,FZR1
0.6336
More...
Q4KWH8
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
DEG_APCC_KENBOX_2
994:998
GKENS
APC,CDC20,FZR1
0.6486
More...
Q8TCG5
Carnitine O-palmitoyltransferase 1, brain isoform
DEG_APCC_KENBOX_2
776:780
GKENS
APC,CDC20,FZR1
0.5545
More...
Q9NZJ0
Denticleless protein homolog
DEG_APCC_KENBOX_2
651:655
GKENS
APC,CDC20,FZR1
0.9981
More...
Q96T92
Insulinoma-associated protein 2
DEG_APCC_KENBOX_2
353:357
GKENS
APC,CDC20,FZR1
0.8158
More...