DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KKENV
Uniprot ID:
Q9UBT6
Source protein:
DNA polymerase kappa
Source gene:
POLK
Class:
DEG_APCC_KENBOX_2
Location:
671:675
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.755
ASA_SCORE:
121.36
COIL:
0.9272
CONS_SCORE:
0.2162
DSS_SCORE:
0.3207
HELIX:
0.0496
FCONS_SCORE:
1.0093
RIG_SCORE:
0.7158
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N670S
TCGA-B5-A0JR
UCEC
TCGA
KKENV
DEG_APCC_KENBOX_2
0.3056
p.F671L
DO10582
COAD
ICGC
KKENV
DEG_APCC_KENBOX_2
0.6981
p.D668Y
DO229027
LICA
ICGC
KKENV
DEG_APCC_KENBOX_2
0.3611
p.P663L
DO232761
PBCA
ICGC
KKENV
DEG_APCC_KENBOX_2
0.1111
p.S678A
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
KKENV
DEG_APCC_KENBOX_2
0.25
p.C681R
SIDM01113
Other Sarcomas
GDSC
KKENV
DEG_APCC_KENBOX_2
0.1667
p.C681R
ACH-000939
Sarcoma
CCLE
KKENV
DEG_APCC_KENBOX_2
0.1667
p.C681R
SK-UT-1
soft_tissue
COSMIC
KKENV
DEG_APCC_KENBOX_2
0.1667
p.N670K
SIDM01770
Gastric Carcinoma
GDSC
KKENV
DEG_APCC_KENBOX_2
0.3056
p.N670K
ACH-000908
Gastric Cancer
CCLE
KKENV
DEG_APCC_KENBOX_2
0.3056
p.K672N
COR-L88
lung
COSMIC
KKENV
DEG_APCC_KENBOX_2
0.6918
Drug responses associated with POLK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T5U3
Rho GTPase-activating protein 21
DEG_APCC_KENBOX_2
1443:1447
KKENV
APC,CDC20,FZR1
0.981
More...
Q68DQ2
Very large A-kinase anchor protein
DEG_APCC_KENBOX_2
61:65
KKENV
APC,CDC20,FZR1
0.9305
More...
Q8TCU4
Alstrom syndrome protein 1
DEG_APCC_KENBOX_2
3973:3977
KKENV
APC,CDC20,FZR1
0.9034
More...
Q9UBT6
DNA polymerase kappa
DEG_APCC_KENBOX_2
671:675
KKENV
APC,CDC20,FZR1
0.755
More...
Q3MJ40
Coiled-coil domain-containing protein 144B
DEG_APCC_KENBOX_2
517:521
KKENV
APC,CDC20,FZR1
0.5338
More...