DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LITPHVS
Uniprot ID:
P49792
Source protein:
E3 SUMO-protein ligase RanBP2
Source gene:
RANBP2
Class:
DEG_SCF_FBW7_1
Location:
2448:2454
E3 ligase:
FBXW7
DEGRON score:
0.9319
ASA_SCORE:
97.3429
COIL:
0.8494
CONS_SCORE:
0.3562
DSS_SCORE:
0.5874
HELIX:
0.0273
FCONS_SCORE:
0.9856
RIG_SCORE:
0.7028
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A2442T
TCGA-86-8674
LUAD
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.1667
p.A2442T
DO25535
LUAD
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.1667
p.D2446Y
TCGA-A5-A2K5
UCEC
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.2778
p.D2446Y
TCGA-D1-A17Q
UCEC
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.2778
p.D2446Y
DO41903
UCEC
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.2778
p.D2446Y
DO41379
UCEC
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.2778
p.H2452Y
TCGA-D3-A3MV
SKCM
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.6118
p.H2452Y
DO37727
SKCM
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.6118
p.S2447F
TCGA-EE-A2M6
SKCM
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.75
p.S2447F
DO37976
SKCM
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.75
p.S2447F
SIDM00127
Oral Cavity Carcinoma
GDSC
LITPHVS
DEG_SCF_FBW7_1
0.75
p.S2447F
SIDM01567
Hodgkin's Lymphoma
GDSC
LITPHVS
DEG_SCF_FBW7_1
0.75
p.P2459H
SIDM01943
Colorectal Carcinoma
GDSC
LITPHVS
DEG_SCF_FBW7_1
0.1944
p.S2457G
SIDM01611
Endometrial Carcinoma
GDSC
LITPHVS
DEG_SCF_FBW7_1
0.6944
p.S2457G
ACH-000996
Endometrial/Uterine Cancer
CCLE
LITPHVS
DEG_SCF_FBW7_1
0.6944
p.I2449V
ACH-000990
Endometrial/Uterine Cancer
CCLE
LITPHVS
DEG_SCF_FBW7_1
0.5965
Drug responses associated with RANBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LITPHVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_SCF_FBW7_1
2448:2454
LITPHVS
FBXW7
0.9319
More...
Q99666
RANBP2-like and GRIP domain-containing protein 5/6
DEG_SCF_FBW7_1
1472:1478
LITPHVS
FBXW7
0.9475
More...
A6NKT7
RanBP2-like and GRIP domain-containing protein 3
DEG_SCF_FBW7_1
1473:1479
LITPHVS
FBXW7
0.8721
More...
O14715
RANBP2-like and GRIP domain-containing protein 8
DEG_SCF_FBW7_1
1472:1478
LITPHVS
FBXW7
0.9085
More...
P0DJD0
RANBP2-like and GRIP domain-containing protein 1
DEG_SCF_FBW7_1
1457:1463
LITPHVS
FBXW7
0.8406
More...
P0DJD1
RANBP2-like and GRIP domain-containing protein 2
DEG_SCF_FBW7_1
1465:1471
LITPHVS
FBXW7
0.8004
More...
Q7Z3J3
RanBP2-like and GRIP domain-containing protein 4
DEG_SCF_FBW7_1
1473:1479
LITPHVS
FBXW7
0.9808
More...