DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LITPHVS
Uniprot ID:
Q7Z3J3
Source protein:
RanBP2-like and GRIP domain-containing protein 4
Source gene:
RGPD4
Class:
DEG_SCF_FBW7_1
Location:
1473:1479
E3 ligase:
FBXW7
DEGRON score:
0.9808
ASA_SCORE:
102.6
COIL:
0.91
CONS_SCORE:
0.2155
DSS_SCORE:
0.5874
HELIX:
0.0301
FCONS_SCORE:
0.8247
RIG_SCORE:
0.7028
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1472Y
TCGA-AX-A06F
UCEC
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.75
p.S1472Y
TCGA-BK-A6W3
UCEC
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.75
p.S1472Y
DO50076
UCEC
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.75
p.S1472Y
DO41752
UCEC
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.75
p.S1482N
TCGA-LN-A8HZ
ESCA
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.6944
p.E1469K
TCGA-D3-A8GV
SKCM
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.2222
p.E1469K
DO219477
SKCM
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.2222
p.R1485T
TCGA-66-2785
LUSC
TCGA
LITPHVS
DEG_SCF_FBW7_1
0.1667
p.R1485T
DO26520
LUSC
ICGC
LITPHVS
DEG_SCF_FBW7_1
0.1667
Showing 1 to 9 of 9 entries
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Drug responses associated with RGPD4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LITPHVS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_SCF_FBW7_1
2448:2454
LITPHVS
FBXW7
0.9319
More...
P0DJD0
RANBP2-like and GRIP domain-containing protein 1
DEG_SCF_FBW7_1
1457:1463
LITPHVS
FBXW7
0.8406
More...
P0DJD1
RANBP2-like and GRIP domain-containing protein 2
DEG_SCF_FBW7_1
1465:1471
LITPHVS
FBXW7
0.8004
More...
A6NKT7
RanBP2-like and GRIP domain-containing protein 3
DEG_SCF_FBW7_1
1473:1479
LITPHVS
FBXW7
0.8721
More...
Q7Z3J3
RanBP2-like and GRIP domain-containing protein 4
DEG_SCF_FBW7_1
1473:1479
LITPHVS
FBXW7
0.9808
More...
Q99666
RANBP2-like and GRIP domain-containing protein 5/6
DEG_SCF_FBW7_1
1472:1478
LITPHVS
FBXW7
0.9475
More...
O14715
RANBP2-like and GRIP domain-containing protein 8
DEG_SCF_FBW7_1
1472:1478
LITPHVS
FBXW7
0.9085
More...
Showing 1 to 7 of 7 entries
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