DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PFSST
Uniprot ID:
P53804
Source protein:
E3 ubiquitin-protein ligase TTC3
Source gene:
TTC3
Class:
DEG_SPOP_SBC_1
Location:
1013:1017
E3 ligase:
SPOP
DEGRON score:
0.9797
ASA_SCORE:
63.8
COIL:
0.7664
CONS_SCORE:
0.3834
DSS_SCORE:
0.5772
HELIX:
0.128
FCONS_SCORE:
0.8038
RIG_SCORE:
0.6801
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1026N
TCGA-64-1681
LUAD
TCGA
PFSST
DEG_SPOP_SBC_1
0.1944
p.K1026N
DO23899
LUAD
ICGC
PFSST
DEG_SPOP_SBC_1
0.1944
p.A1012S
DO228974
LICA
ICGC
PFSST
DEG_SPOP_SBC_1
0.3056
p.V1003L
DO228976
LICA
ICGC
PFSST
DEG_SPOP_SBC_1
0.0556
p.K1018N
DO228985
LICA
ICGC
PFSST
DEG_SPOP_SBC_1
0.75
p.G1010C
DO23372
LINC
ICGC
PFSST
DEG_SPOP_SBC_1
0.25
p.K1020R
DO23320
LINC
ICGC
PFSST
DEG_SPOP_SBC_1
0.3611
p.S1015T
SIDM02075
Colorectal Carcinoma
GDSC
PFSST
DEG_SPOP_SBC_1
0.6005
Drug responses associated with TTC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PFSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A2RUB1
Meiosis-specific coiled-coil domain-containing protein MEIOC
DEG_SPOP_SBC_1
81:85
PFSST
SPOP
0.9486
More...
O95359
Transforming acidic coiled-coil-containing protein 2
DEG_SPOP_SBC_1
2349:2353
PFSST
SPOP
0.9988
More...
P53804
E3 ubiquitin-protein ligase TTC3
DEG_SPOP_SBC_1
1013:1017
PFSST
SPOP
0.9797
More...
Q9UNF0
Protein kinase C and casein kinase substrate in neurons protein 2
DEG_SPOP_SBC_1
406:410
PFSST
SPOP
0.9979
More...
O75808
Calpain-15
DEG_SPOP_SBC_1
234:238
PFSST
SPOP
0.9598
More...
Q53SZ7
Proline-rich protein 30
DEG_SPOP_SBC_1
50:54
PFSST
SPOP
0.8135
More...