DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PNSTS
Uniprot ID:
Q86XR5
Source protein:
Proline-rich membrane anchor 1
Source gene:
PRIMA1
Class:
DEG_SPOP_SBC_1
Location:
78:82
E3 ligase:
SPOP
DEGRON score:
0.5226
ASA_SCORE:
86.44
COIL:
0.9106
CONS_SCORE:
0.6186
DSS_SCORE:
0.444
HELIX:
0.0246
FCONS_SCORE:
0.948
RIG_SCORE:
0.602
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G92W
TCGA-05-4396
LUAD
TCGA
PNSTS
DEG_SPOP_SBC_1
0.0556
p.G92W
TCGA-GN-A26C
SKCM
TCGA
PNSTS
DEG_SPOP_SBC_1
0.0556
p.G92W
TCGA-HE-7129
KIRP
TCGA
PNSTS
DEG_SPOP_SBC_1
0.0556
p.G92W
DO20786
KIRP
ICGC
PNSTS
DEG_SPOP_SBC_1
0.0556
p.G92W
DO23838
LUAD
ICGC
PNSTS
DEG_SPOP_SBC_1
0.0556
p.G92W
DO37782
SKCM
ICGC
PNSTS
DEG_SPOP_SBC_1
0.0556
p.S74C
TCGA-CV-7414
HNSC
TCGA
PNSTS
DEG_SPOP_SBC_1
0.2222
p.S74C
DO15631
HNSC
ICGC
PNSTS
DEG_SPOP_SBC_1
0.2222
p.S82F
TCGA-EE-A3AC
SKCM
TCGA
PNSTS
DEG_SPOP_SBC_1
0.7982
p.S82F
DO37631
SKCM
ICGC
PNSTS
DEG_SPOP_SBC_1
0.7982
p.S88I
TCGA-EO-A22R
UCEC
TCGA
PNSTS
DEG_SPOP_SBC_1
0.1667
p.S88I
DO42713
UCEC
ICGC
PNSTS
DEG_SPOP_SBC_1
0.1667
p.P76T
SIDM00708
Non-Small Cell Lung Carcinoma
GDSC
PNSTS
DEG_SPOP_SBC_1
0.2778
p.P76T
ACH-000841
Lung Cancer
CCLE
PNSTS
DEG_SPOP_SBC_1
0.2778
p.P76T
NCI-H2087
lung
COSMIC
PNSTS
DEG_SPOP_SBC_1
0.2778
p.R71T
ACH-000891
Lung Cancer
CCLE
PNSTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with PRIMA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14258
E3 ubiquitin/ISG15 ligase TRIM25
DEG_SPOP_SBC_1
431:435
PNSTS
SPOP
0.9986
More...
Q8WXX7
Autism susceptibility gene 2 protein
DEG_SPOP_SBC_1
954:958
PNSTS
SPOP
0.9978
More...
Q9UI40
Sodium/potassium/calcium exchanger 2
DEG_SPOP_SBC_1
415:419
PNSTS
SPOP
0.9879
More...
Q86XR5
Proline-rich membrane anchor 1
DEG_SPOP_SBC_1
78:82
PNSTS
SPOP
0.5226
More...
Q7Z422
SUZ domain-containing protein 1
DEG_SPOP_SBC_1
75:79
PNSTS
SPOP
0.9778
More...