DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNTSS
Uniprot ID:
Q17RS7
Source protein:
Flap endonuclease GEN homolog 1
Source gene:
GEN1
Class:
DEG_SPOP_SBC_1
Location:
570:574
E3 ligase:
SPOP
DEGRON score:
0.7349
ASA_SCORE:
81.14
COIL:
0.8726
CONS_SCORE:
0.3161
DSS_SCORE:
0.383
HELIX:
0.1008
FCONS_SCORE:
0.8975
RIG_SCORE:
0.6173
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I577M
TCGA-A5-A0VQ
UCEC
TCGA
PNTSS
DEG_SPOP_SBC_1
0.25
p.I577M
DO42113
UCEC
ICGC
PNTSS
DEG_SPOP_SBC_1
0.25
p.S574Y
TCGA-AP-A1E0
UCEC
TCGA
PNTSS
DEG_SPOP_SBC_1
0.712
p.S574Y
DO43154
UCEC
ICGC
PNTSS
DEG_SPOP_SBC_1
0.712
p.L583I
TCGA-DK-A2I2
BLCA
TCGA
PNTSS
DEG_SPOP_SBC_1
0.0833
p.L583I
DO708
BLCA
ICGC
PNTSS
DEG_SPOP_SBC_1
0.0833
p.I564F
DO222477
ESCA
ICGC
PNTSS
DEG_SPOP_SBC_1
0.1667
p.V579L
DO229032
LICA
ICGC
PNTSS
DEG_SPOP_SBC_1
0.1944
p.I564T
DO231176
LUSC
ICGC
PNTSS
DEG_SPOP_SBC_1
0.1667
p.S560N
SIDM01652
Non-Cancerous
GDSC
PNTSS
DEG_SPOP_SBC_1
0.0556
p.S560N
SIDM00187
Kidney Carcinoma
GDSC
PNTSS
DEG_SPOP_SBC_1
0.0556
p.S560N
ACH-002352
Non-Cancerous
CCLE
PNTSS
DEG_SPOP_SBC_1
0.0556
p.N571S
SIDM00202
Ewing's Sarcoma
GDSC
PNTSS
DEG_SPOP_SBC_1
0.5958
p.N571S
ACH-002118
Bone Cancer
CCLE
PNTSS
DEG_SPOP_SBC_1
0.5958
p.N571S
EW-3
bone
COSMIC
PNTSS
DEG_SPOP_SBC_1
0.5958
p.K561E
SIDM01045
Endometrial Carcinoma
GDSC
PNTSS
DEG_SPOP_SBC_1
0.1944
p.K561E
ACH-000978
Endometrial/Uterine Cancer
CCLE
PNTSS
DEG_SPOP_SBC_1
0.1944
p.K561E
EN
endometrium
COSMIC
PNTSS
DEG_SPOP_SBC_1
0.1944
p.S567C
ACH-001411
Bladder Cancer
CCLE
PNTSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with GEN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43314
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2
DEG_SPOP_SBC_1
1217:1221
PNTSS
SPOP
0.9788
More...
O60242
Adhesion G protein-coupled receptor B3
DEG_SPOP_SBC_1
1455:1459
PNTSS
SPOP
0.981
More...
P06213
Insulin receptor
DEG_SPOP_SBC_1
781:785
PNTSS
SPOP
0.9753
More...
Q17RS7
Flap endonuclease GEN homolog 1
DEG_SPOP_SBC_1
570:574
PNTSS
SPOP
0.7349
More...
Q9UN79
Transcription factor SOX-13
DEG_SPOP_SBC_1
305:309
PNTSS
SPOP
0.9656
More...