DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNTSS
Uniprot ID:
Q9UN79
Source protein:
Transcription factor SOX-13
Source gene:
SOX13
Class:
DEG_SPOP_SBC_1
Location:
305:309
E3 ligase:
SPOP
DEGRON score:
0.9656
ASA_SCORE:
81.94
COIL:
0.9396
CONS_SCORE:
0.4303
DSS_SCORE:
0.7173
HELIX:
0.0356
FCONS_SCORE:
0.9293
RIG_SCORE:
0.5485
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M315I
TCGA-63-A5MT
LUSC
TCGA
PNTSS
DEG_SPOP_SBC_1
0.1667
p.M315I
DO219163
LUSC
ICGC
PNTSS
DEG_SPOP_SBC_1
0.1667
p.A301D
TCGA-AN-A0AT
BRCA
TCGA
PNTSS
DEG_SPOP_SBC_1
0.2222
p.A301D
DO2783
BRCA
ICGC
PNTSS
DEG_SPOP_SBC_1
0.2222
p.P299L
DO222794
COCA
ICGC
PNTSS
DEG_SPOP_SBC_1
0.1667
p.K298N
DO229037
LICA
ICGC
PNTSS
DEG_SPOP_SBC_1
0.25
p.E303K
SIDM00627
Cervical Carcinoma
GDSC
PNTSS
DEG_SPOP_SBC_1
0.2778
p.E303K
ME-180
cervix
COSMIC
PNTSS
DEG_SPOP_SBC_1
0.2778
p.S312I
ACH-000954
Endometrial/Uterine Cancer
CCLE
PNTSS
DEG_SPOP_SBC_1
0.6944
Drug responses associated with SOX13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43314
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2
DEG_SPOP_SBC_1
1217:1221
PNTSS
SPOP
0.9788
More...
O60242
Adhesion G protein-coupled receptor B3
DEG_SPOP_SBC_1
1455:1459
PNTSS
SPOP
0.981
More...
P06213
Insulin receptor
DEG_SPOP_SBC_1
781:785
PNTSS
SPOP
0.9753
More...
Q17RS7
Flap endonuclease GEN homolog 1
DEG_SPOP_SBC_1
570:574
PNTSS
SPOP
0.7349
More...
Q9UN79
Transcription factor SOX-13
DEG_SPOP_SBC_1
305:309
PNTSS
SPOP
0.9656
More...