DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PWSST
Uniprot ID:
Q13505
Source protein:
Metaxin-1
Source gene:
MTX1
Class:
DEG_SPOP_SBC_1
Location:
19:23
E3 ligase:
SPOP
DEGRON score:
0.8991
ASA_SCORE:
68.58
COIL:
0.736
CONS_SCORE:
0.1253
DSS_SCORE:
0.7496
HELIX:
0.0804
FCONS_SCORE:
0.9436
RIG_SCORE:
0.5545
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S22N
TCGA-EJ-5495
PRAD
TCGA
PWSST
DEG_SPOP_SBC_1
0.7069
p.S22N
DO36258
PRAD
ICGC
PWSST
DEG_SPOP_SBC_1
0.7069
p.G29R
DO23490
LINC
ICGC
PWSST
DEG_SPOP_SBC_1
0.1667
p.G13C
DO230525
LUSC
ICGC
PWSST
DEG_SPOP_SBC_1
0.1667
p.D22G
DO229257
THCA
ICGC
PWSST
DEG_SPOP_SBC_1
0.7198
p.P16S
DO41199
UCEC
ICGC
PWSST
DEG_SPOP_SBC_1
0.25
p.R11H
ACH-000980
Lung Cancer
CCLE
PWSST
DEG_SPOP_SBC_1
0.1111
Drug responses associated with MTX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PWSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49335
POU domain, class 3, transcription factor 4
DEG_SPOP_SBC_1
66:70
PWSST
SPOP
0.5761
More...
Q13505
Metaxin-1
DEG_SPOP_SBC_1
19:23
PWSST
SPOP
0.8991
More...
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SPOP_SBC_1
1613:1617
PWSST
SPOP
0.9884
More...
Q9Y2K5
R3H domain-containing protein 2
DEG_SPOP_SBC_1
327:331
PWSST
SPOP
0.9984
More...
Q15032
R3H domain-containing protein 1
DEG_SPOP_SBC_1
359:363
PWSST
SPOP
0.9986
More...