DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PWSST
Uniprot ID:
Q15032
Source protein:
R3H domain-containing protein 1
Source gene:
R3HDM1
Class:
DEG_SPOP_SBC_1
Location:
359:363
E3 ligase:
SPOP
DEGRON score:
0.9986
ASA_SCORE:
79.3
COIL:
0.8832
CONS_SCORE:
0.4999
DSS_SCORE:
0.5219
HELIX:
0.0496
FCONS_SCORE:
1.2633
RIG_SCORE:
0.6326
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R370Q
TCGA-3B-A9HT
SARC
TCGA
PWSST
DEG_SPOP_SBC_1
0.1389
p.G363D
DO223732
CESC
ICGC
PWSST
DEG_SPOP_SBC_1
0.7198
p.G363D
DO222755
COCA
ICGC
PWSST
DEG_SPOP_SBC_1
0.7198
p.L365V
DO14228
HNSC
ICGC
PWSST
DEG_SPOP_SBC_1
0.7222
p.S352F
DO23466
LINC
ICGC
PWSST
DEG_SPOP_SBC_1
0.1389
p.T362A
DO41331
UCEC
ICGC
PWSST
DEG_SPOP_SBC_1
0.7139
p.E351K
SIDM01318
Hepatocellular Carcinoma
GDSC
PWSST
DEG_SPOP_SBC_1
0.1111
p.K353N
ACH-000578
Lung Cancer
CCLE
PWSST
DEG_SPOP_SBC_1
0.2778
p.S354A
ACH-001610
Brain Cancer
CCLE
PWSST
DEG_SPOP_SBC_1
0.6389
p.S353G
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
PWSST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with R3HDM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PWSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49335
POU domain, class 3, transcription factor 4
DEG_SPOP_SBC_1
66:70
PWSST
SPOP
0.5761
More...
Q13505
Metaxin-1
DEG_SPOP_SBC_1
19:23
PWSST
SPOP
0.8991
More...
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SPOP_SBC_1
1613:1617
PWSST
SPOP
0.9884
More...
Q9Y2K5
R3H domain-containing protein 2
DEG_SPOP_SBC_1
327:331
PWSST
SPOP
0.9984
More...
Q15032
R3H domain-containing protein 1
DEG_SPOP_SBC_1
359:363
PWSST
SPOP
0.9986
More...