DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PWSST
Uniprot ID:
Q9Y2K5
Source protein:
R3H domain-containing protein 2
Source gene:
R3HDM2
Class:
DEG_SPOP_SBC_1
Location:
327:331
E3 ligase:
SPOP
DEGRON score:
0.9984
ASA_SCORE:
76.84
COIL:
0.8346
CONS_SCORE:
0.4318
DSS_SCORE:
0.5787
HELIX:
0.0376
FCONS_SCORE:
1.2127
RIG_SCORE:
0.6126
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S329N
TCGA-DK-A2I4
BLCA
TCGA
PWSST
DEG_SPOP_SBC_1
0.7069
p.S322Y
TCGA-O2-A52S
LUSC
TCGA
PWSST
DEG_SPOP_SBC_1
0.1944
p.R338W
TCGA-Z2-A8RT
SKCM
TCGA
PWSST
DEG_SPOP_SBC_1
0.1389
p.D317E
DO229035
LICA
ICGC
PWSST
DEG_SPOP_SBC_1
0.0556
p.Q323H
DO23874
LUAD
ICGC
PWSST
DEG_SPOP_SBC_1
0.2222
p.R317S
DO45322
LUAD
ICGC
PWSST
DEG_SPOP_SBC_1
0.0556
p.R317M
DO41999
UCEC
ICGC
PWSST
DEG_SPOP_SBC_1
0.0556
p.M340T
SIDM01667
B-Cell Non-Hodgkin's Lymphoma
GDSC
PWSST
DEG_SPOP_SBC_1
0.0833
p.M340T
ACH-000220
Lymphoma
CCLE
PWSST
DEG_SPOP_SBC_1
0.0833
p.Q318L
HCC-15
lung
COSMIC
PWSST
DEG_SPOP_SBC_1
0.0833
Drug responses associated with R3HDM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PWSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49335
POU domain, class 3, transcription factor 4
DEG_SPOP_SBC_1
66:70
PWSST
SPOP
0.5761
More...
Q13505
Metaxin-1
DEG_SPOP_SBC_1
19:23
PWSST
SPOP
0.8991
More...
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SPOP_SBC_1
1613:1617
PWSST
SPOP
0.9884
More...
Q9Y2K5
R3H domain-containing protein 2
DEG_SPOP_SBC_1
327:331
PWSST
SPOP
0.9984
More...
Q15032
R3H domain-containing protein 1
DEG_SPOP_SBC_1
359:363
PWSST
SPOP
0.9986
More...