DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PYTSS
Uniprot ID:
A6NJB7
Source protein:
Proline-rich protein 19
Source gene:
PRR19
Class:
DEG_SPOP_SBC_1
Location:
242:246
E3 ligase:
SPOP
DEGRON score:
0.9984
ASA_SCORE:
76
COIL:
0.9032
CONS_SCORE:
0.5357
DSS_SCORE:
0.5987
HELIX:
0.0276
FCONS_SCORE:
1.1912
RIG_SCORE:
0.6594
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F237L
TCGA-CI-6620
READ
TCGA
PYTSS
DEG_SPOP_SBC_1
0.1944
p.F237L
DO36825
READ
ICGC
PYTSS
DEG_SPOP_SBC_1
0.1944
p.A250G
SIDM01318
Hepatocellular Carcinoma
GDSC
PYTSS
DEG_SPOP_SBC_1
0.2222
p.A250G
ACH-001318
Liver Cancer
CCLE
PYTSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with PRR19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00482
Nuclear receptor subfamily 5 group A member 2
DEG_SPOP_SBC_1
276:280
PYTSS
SPOP
0.8022
More...
O75925
E3 SUMO-protein ligase PIAS1
DEG_SPOP_SBC_1
582:586
PYTSS
SPOP
0.8855
More...
P28906
Hematopoietic progenitor cell antigen CD34
DEG_SPOP_SBC_1
160:164
PYTSS
SPOP
0.596
More...
Q07157
Tight junction protein ZO-1
DEG_SPOP_SBC_1
1531:1535
PYTSS
SPOP
0.9971
More...
A6NJB7
Proline-rich protein 19
DEG_SPOP_SBC_1
242:246
PYTSS
SPOP
0.9984
More...