DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PYTSS
Uniprot ID:
P28906
Source protein:
Hematopoietic progenitor cell antigen CD34
Source gene:
CD34
Class:
DEG_SPOP_SBC_1
Location:
160:164
E3 ligase:
SPOP
DEGRON score:
0.596
ASA_SCORE:
83.6
COIL:
0.8732
CONS_SCORE:
0.4098
DSS_SCORE:
0.4511
HELIX:
0.0268
FCONS_SCORE:
0.7993
RIG_SCORE:
0.6861
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T155I
TCGA-17-Z017
LUAD
TCGA
PYTSS
DEG_SPOP_SBC_1
0.1944
p.S165Y
TCGA-BK-A6W3
UCEC
TCGA
PYTSS
DEG_SPOP_SBC_1
0.3056
p.S165Y
DO222762
COCA
ICGC
PYTSS
DEG_SPOP_SBC_1
0.3056
p.S165Y
DO50076
UCEC
ICGC
PYTSS
DEG_SPOP_SBC_1
0.3056
p.S165Y
SIDM01588
Endometrial Carcinoma
GDSC
PYTSS
DEG_SPOP_SBC_1
0.3056
p.S165Y
ACH-000993
Endometrial/Uterine Cancer
CCLE
PYTSS
DEG_SPOP_SBC_1
0.3056
p.P157L
TCGA-CV-6956
HNSC
TCGA
PYTSS
DEG_SPOP_SBC_1
0.25
p.P157L
DO15815
HNSC
ICGC
PYTSS
DEG_SPOP_SBC_1
0.25
p.A154E
DO228971
LICA
ICGC
PYTSS
DEG_SPOP_SBC_1
0.1667
p.P160L
DO232761
PBCA
ICGC
PYTSS
DEG_SPOP_SBC_1
0.7582
p.S152I
DO232224
PBCA
ICGC
PYTSS
DEG_SPOP_SBC_1
0.1111
p.K159E
DO229456
SKCA
ICGC
PYTSS
DEG_SPOP_SBC_1
0.3056
p.R157H
Farage
haematopoietic_and_lymphoid_tissue
COSMIC
PYTSS
DEG_SPOP_SBC_1
0.25
p.R157H
OE33
oesophagus
COSMIC
PYTSS
DEG_SPOP_SBC_1
0.25
p.E174G
OSC-20
upper_aerodigestive_tract
COSMIC
PYTSS
DEG_SPOP_SBC_1
0.0556
p.R165W
HCC1569
breast
COSMIC
PYTSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with CD34 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00482
Nuclear receptor subfamily 5 group A member 2
DEG_SPOP_SBC_1
276:280
PYTSS
SPOP
0.8022
More...
O75925
E3 SUMO-protein ligase PIAS1
DEG_SPOP_SBC_1
582:586
PYTSS
SPOP
0.8855
More...
P28906
Hematopoietic progenitor cell antigen CD34
DEG_SPOP_SBC_1
160:164
PYTSS
SPOP
0.596
More...
Q07157
Tight junction protein ZO-1
DEG_SPOP_SBC_1
1531:1535
PYTSS
SPOP
0.9971
More...
A6NJB7
Proline-rich protein 19
DEG_SPOP_SBC_1
242:246
PYTSS
SPOP
0.9984
More...