DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PYTSS
Uniprot ID:
O00482
Source protein:
Nuclear receptor subfamily 5 group A member 2
Source gene:
NR5A2
Class:
DEG_SPOP_SBC_1
Location:
276:280
E3 ligase:
SPOP
DEGRON score:
0.8022
ASA_SCORE:
55.52
COIL:
0.8596
CONS_SCORE:
0.5078
DSS_SCORE:
0.4186
HELIX:
0.068
FCONS_SCORE:
1.2228
RIG_SCORE:
0.6813
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A268V
TCGA-VQ-A91D
STAD
TCGA
PYTSS
DEG_SPOP_SBC_1
0.1111
p.A268V
DO51783
STAD
ICGC
PYTSS
DEG_SPOP_SBC_1
0.1111
p.E272Q
TCGA-ZF-A9RD
BLCA
TCGA
PYTSS
DEG_SPOP_SBC_1
0.2222
p.R267W
DO233726
GACA
ICGC
PYTSS
DEG_SPOP_SBC_1
0.0833
p.D268G
DO48733
LIRI
ICGC
PYTSS
DEG_SPOP_SBC_1
0.1111
p.E269G
DO48733
LIRI
ICGC
PYTSS
DEG_SPOP_SBC_1
0.1389
p.E266K
DO228017
SKCA
ICGC
PYTSS
DEG_SPOP_SBC_1
0.0556
p.Q279L
QGP-1
pancreas
COSMIC
PYTSS
DEG_SPOP_SBC_1
0.7765
Drug responses associated with NR5A2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00482
Nuclear receptor subfamily 5 group A member 2
DEG_SPOP_SBC_1
276:280
PYTSS
SPOP
0.8022
More...
O75925
E3 SUMO-protein ligase PIAS1
DEG_SPOP_SBC_1
582:586
PYTSS
SPOP
0.8855
More...
P28906
Hematopoietic progenitor cell antigen CD34
DEG_SPOP_SBC_1
160:164
PYTSS
SPOP
0.596
More...
Q07157
Tight junction protein ZO-1
DEG_SPOP_SBC_1
1531:1535
PYTSS
SPOP
0.9971
More...
A6NJB7
Proline-rich protein 19
DEG_SPOP_SBC_1
242:246
PYTSS
SPOP
0.9984
More...