DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKENE
Uniprot ID:
Q14966
Source protein:
Zinc finger protein 638
Source gene:
ZNF638
Class:
DEG_APCC_KENBOX_2
Location:
478:482
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7217
ASA_SCORE:
133.34
COIL:
0.8014
CONS_SCORE:
0.7502
DSS_SCORE:
0.7549
HELIX:
0.1928
FCONS_SCORE:
1.0534
RIG_SCORE:
0.5593
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R472K
TCGA-B5-A0JY
UCEC
TCGA
RKENE
DEG_APCC_KENBOX_2
0.1667
p.R472K
DO43041
UCEC
ICGC
RKENE
DEG_APCC_KENBOX_2
0.1667
p.R485Q
TCGA-BS-A0UV
UCEC
TCGA
RKENE
DEG_APCC_KENBOX_2
0.25
p.R485Q
TCGA-CA-6718
COAD
TCGA
RKENE
DEG_APCC_KENBOX_2
0.25
p.R485Q
TCGA-EO-A3B0
UCEC
TCGA
RKENE
DEG_APCC_KENBOX_2
0.25
p.R485Q
DO7801
COAD
ICGC
RKENE
DEG_APCC_KENBOX_2
0.25
p.R485Q
DO219773
UCEC
ICGC
RKENE
DEG_APCC_KENBOX_2
0.25
p.R485Q
DO42793
UCEC
ICGC
RKENE
DEG_APCC_KENBOX_2
0.25
p.R485Q
SIDM00438
B-Lymphoblastic Leukemia
GDSC
RKENE
DEG_APCC_KENBOX_2
0.25
p.R485Q
ACH-002275
Leukemia
CCLE
RKENE
DEG_APCC_KENBOX_2
0.25
p.R485Q
MN-60
haematopoietic_and_lymphoid_tissue
COSMIC
RKENE
DEG_APCC_KENBOX_2
0.25
p.P491S
TCGA-DA-A95Z
SKCM
TCGA
RKENE
DEG_APCC_KENBOX_2
0.0833
p.P491S
DO219481
SKCM
ICGC
RKENE
DEG_APCC_KENBOX_2
0.0833
p.S488C
TCGA-DD-AAD5
LIHC
TCGA
RKENE
DEG_APCC_KENBOX_2
0.6111
p.S488C
DO52222
LIHC
ICGC
RKENE
DEG_APCC_KENBOX_2
0.6111
p.R487H
TCGA-FI-A2D5
UCEC
TCGA
RKENE
DEG_APCC_KENBOX_2
0.1944
p.R487H
DO41331
UCEC
ICGC
RKENE
DEG_APCC_KENBOX_2
0.1944
p.I468L
TCGA-HT-7470
LGG
TCGA
RKENE
DEG_APCC_KENBOX_2
0.0556
p.I468L
DO22209
LGG
ICGC
RKENE
DEG_APCC_KENBOX_2
0.0556
p.N474D
DO228585
LICA
ICGC
RKENE
DEG_APCC_KENBOX_2
0.2222
p.S492I
DO229031
LICA
ICGC
RKENE
DEG_APCC_KENBOX_2
0.5
p.R486T
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
RKENE
DEG_APCC_KENBOX_2
0.2222
p.R486T
ACH-000924
Lung Cancer
CCLE
RKENE
DEG_APCC_KENBOX_2
0.2222
p.R486T
NCI-H2172
lung
COSMIC
RKENE
DEG_APCC_KENBOX_2
0.2222
p.R487C
SIDM01080
Oral Cavity Carcinoma
GDSC
RKENE
DEG_APCC_KENBOX_2
0.1944
p.R487C
SCC-9
upper_aerodigestive_tract
COSMIC
RKENE
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with ZNF638 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14966
Zinc finger protein 638
DEG_APCC_KENBOX_2
478:482
RKENE
APC,CDC20,FZR1
0.7217
More...
Q15170
Transcription elongation factor A protein-like 1
DEG_APCC_KENBOX_2
5:9
RKENE
APC,CDC20,FZR1
0.9469
More...
Q5TCQ9
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3
DEG_APCC_KENBOX_2
856:860
RKENE
APC,CDC20,FZR1
0.9466
More...
Q8IUC8
Polypeptide N-acetylgalactosaminyltransferase 13
DEG_APCC_KENBOX_2
447:451
RKENE
APC,CDC20,FZR1
0.5702
More...
Q8N3J5
Protein phosphatase 1K, mitochondrial
DEG_APCC_KENBOX_2
104:108
RKENE
APC,CDC20,FZR1
0.9571
More...