DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RKENE
Uniprot ID:
Q5TCQ9
Source protein:
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3
Source gene:
MAGI3
Class:
DEG_APCC_KENBOX_2
Location:
856:860
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9466
ASA_SCORE:
119.96
COIL:
0.6088
CONS_SCORE:
0.4735
DSS_SCORE:
0.3416
HELIX:
0.0178
FCONS_SCORE:
1.5116
RIG_SCORE:
0.7487
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G863D
TCGA-06-5416
GBM
TCGA
RKENE
DEG_APCC_KENBOX_2
0.25
p.G863D
DO10880
GBM
ICGC
RKENE
DEG_APCC_KENBOX_2
0.25
p.L854S
TCGA-AA-3977
COAD
TCGA
RKENE
DEG_APCC_KENBOX_2
0.2778
p.L854S
DO8730
COAD
ICGC
RKENE
DEG_APCC_KENBOX_2
0.2778
p.T868A
TCGA-BR-7707
STAD
TCGA
RKENE
DEG_APCC_KENBOX_2
0.1111
p.T868A
DO38487
STAD
ICGC
RKENE
DEG_APCC_KENBOX_2
0.1111
p.R856Q
TCGA-FS-A1ZC
SKCM
TCGA
RKENE
DEG_APCC_KENBOX_2
0.6218
p.R856Q
DO37487
SKCM
ICGC
RKENE
DEG_APCC_KENBOX_2
0.6218
p.T868I
TCGA-W3-AA1V
SKCM
TCGA
RKENE
DEG_APCC_KENBOX_2
0.1111
p.T868I
DO51276
SKCM
ICGC
RKENE
DEG_APCC_KENBOX_2
0.1111
p.E858D
DO8264
COAD
ICGC
RKENE
DEG_APCC_KENBOX_2
0.6758
p.D851N
DO228890
LICA
ICGC
RKENE
DEG_APCC_KENBOX_2
0.1944
p.V852F
DO229006
LICA
ICGC
RKENE
DEG_APCC_KENBOX_2
0.2222
p.T853K
NB12
autonomic_ganglia
COSMIC
RKENE
DEG_APCC_KENBOX_2
0.25
Drug responses associated with MAGI3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14966
Zinc finger protein 638
DEG_APCC_KENBOX_2
478:482
RKENE
APC,CDC20,FZR1
0.7217
More...
Q15170
Transcription elongation factor A protein-like 1
DEG_APCC_KENBOX_2
5:9
RKENE
APC,CDC20,FZR1
0.9469
More...
Q5TCQ9
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3
DEG_APCC_KENBOX_2
856:860
RKENE
APC,CDC20,FZR1
0.9466
More...
Q8IUC8
Polypeptide N-acetylgalactosaminyltransferase 13
DEG_APCC_KENBOX_2
447:451
RKENE
APC,CDC20,FZR1
0.5702
More...
Q8N3J5
Protein phosphatase 1K, mitochondrial
DEG_APCC_KENBOX_2
104:108
RKENE
APC,CDC20,FZR1
0.9571
More...