DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SGSSGE
Uniprot ID:
Q6NUJ5
Source protein:
PWWP domain-containing protein 2B
Source gene:
PWWP2B
Class:
DEG_Kelch_Keap1_1
Location:
382:387
E3 ligase:
KEAP1
DEGRON score:
0.9831
ASA_SCORE:
69.65
COIL:
0.852
CONS_SCORE:
0.5486
DSS_SCORE:
0.5821
HELIX:
0.0937
FCONS_SCORE:
1.0336
RIG_SCORE:
0.5354
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E387K
TCGA-18-3414
LUSC
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.7022
p.E387K
DO26629
LUSC
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.7022
p.S382F
TCGA-GN-A26C
SKCM
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.7982
p.S382F
DO37782
SKCM
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.7982
p.S381P
TCGA-IB-7651
PAAD
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.3056
p.S381P
DO46657
PAAD
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.3056
p.S385L
TCGA-YD-A9TA
SKCM
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.7667
p.S385L
DO219503
SKCM
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.7667
p.G375S
DO35442
PACA
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.1389
p.G375S
SIDM02071
Esophageal Carcinoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.1389
p.G397S
SIDM01096
Colorectal Carcinoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397S
SIDM01109
Other Sarcomas
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397S
SIDM00081
Melanoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397S
SIDM01475
Ovarian Carcinoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397S
SK-CO-1
large_intestine
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397D
SIDM00684
Glioblastoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397D
SIDM00555
Glioblastoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397D
ACH-000595
Brain Cancer
CCLE
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397D
ACH-000631
Brain Cancer
CCLE
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397D
KS-1
central_nervous_system
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.G397D
LN-229
central_nervous_system
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.P395R
SIDM00002
Neuroblastoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.1111
p.P395R
ACH-002340
Neuroblastoma
CCLE
SGSSGE
DEG_Kelch_Keap1_1
0.1111
p.P395R
NBsusSR
autonomic_ganglia
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.1111
p.G376R
ACH-001282
Bone Cancer
CCLE
SGSSGE
DEG_Kelch_Keap1_1
0.1667
Drug responses associated with PWWP2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SGSSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35716
Transcription factor SOX-11
DEG_Kelch_Keap1_1
351:356
SGSSGE
KEAP1
0.9388
More...
Q02156
Protein kinase C epsilon type
DEG_Kelch_Keap1_1
132:137
SGSSGE
KEAP1
0.8528
More...
Q9UGU5
HMG domain-containing protein 4
DEG_Kelch_Keap1_1
153:158
SGSSGE
KEAP1
0.9956
More...
Q6NUJ5
PWWP domain-containing protein 2B
DEG_Kelch_Keap1_1
382:387
SGSSGE
KEAP1
0.9831
More...
Q9NZL6
Ral guanine nucleotide dissociation stimulator-like 1
DEG_Kelch_Keap1_1
544:549
SGSSGE
KEAP1
0.965
More...