DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SGSSGE
Uniprot ID:
Q9NZL6
Source protein:
Ral guanine nucleotide dissociation stimulator-like 1
Source gene:
RGL1
Class:
DEG_Kelch_Keap1_1
Location:
544:549
E3 ligase:
KEAP1
DEGRON score:
0.965
ASA_SCORE:
67.3167
COIL:
0.9202
CONS_SCORE:
0.2871
DSS_SCORE:
0.705
HELIX:
0.0418
FCONS_SCORE:
0.8738
RIG_SCORE:
0.506
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D538V
TCGA-73-4666
LUAD
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.1667
p.S540I
TCGA-A5-A0G1
UCEC
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.3333
p.A539T
TCGA-A5-A0G2
UCEC
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.1944
p.R547L
TCGA-B5-A1MR
UCEC
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.8428
p.R547W
TCGA-CV-7440
HNSC
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.8634
p.P544A
TCGA-DF-A2KU
UCEC
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.7503
p.R553I
TCGA-EO-A22U
UCEC
TCGA
SGSSGE
DEG_Kelch_Keap1_1
0.2222
p.V556M
DO234332
ESAD
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.1389
p.V556M
DO36773
READ
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.1389
p.K540R
DO233897
GACA
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.3333
p.C559F
DO228978
LICA
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.V556L
DO229015
LICA
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.1389
p.S547C
DO27381
LUSC
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.7541
p.S550T
DO30490
OV
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.3056
p.K540M
DO48016
STAD
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.3333
p.G548C
DO229229
THCA
ICGC
SGSSGE
DEG_Kelch_Keap1_1
0.76
p.S555N
SIDM02035
Colorectal Carcinoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.1667
p.L557V
SIDM00777
Colorectal Carcinoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.1111
p.L557V
NCI-H508
large_intestine
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.1111
p.L559V
SIDM00281
Other Solid Cancers
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.L559V
ACH-002100
Skin Cancer
CCLE
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.L559V
DJM-1
skin
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.0556
p.P546H
SIDM00789
Colorectal Carcinoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.7694
p.P546H
ACH-000997
Colon/Colorectal Cancer
CCLE
SGSSGE
DEG_Kelch_Keap1_1
0.7694
p.P546H
HCT-15
large_intestine
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.7694
p.S549N
SIDM00193
Colorectal Carcinoma
GDSC
SGSSGE
DEG_Kelch_Keap1_1
0.7069
p.S549N
ACH-000991
Colon/Colorectal Cancer
CCLE
SGSSGE
DEG_Kelch_Keap1_1
0.7069
p.S549N
SNU-81
large_intestine
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.7069
p.S546T
TE-11
oesophagus
COSMIC
SGSSGE
DEG_Kelch_Keap1_1
0.7116
Drug responses associated with RGL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SGSSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35716
Transcription factor SOX-11
DEG_Kelch_Keap1_1
351:356
SGSSGE
KEAP1
0.9388
More...
Q02156
Protein kinase C epsilon type
DEG_Kelch_Keap1_1
132:137
SGSSGE
KEAP1
0.8528
More...
Q9UGU5
HMG domain-containing protein 4
DEG_Kelch_Keap1_1
153:158
SGSSGE
KEAP1
0.9956
More...
Q6NUJ5
PWWP domain-containing protein 2B
DEG_Kelch_Keap1_1
382:387
SGSSGE
KEAP1
0.9831
More...
Q9NZL6
Ral guanine nucleotide dissociation stimulator-like 1
DEG_Kelch_Keap1_1
544:549
SGSSGE
KEAP1
0.965
More...