DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TKENG
Uniprot ID:
Q7LBC6
Source protein:
Lysine-specific demethylase 3B
Source gene:
KDM3B
Class:
DEG_APCC_KENBOX_2
Location:
360:364
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6934
ASA_SCORE:
102.96
COIL:
0.8336
CONS_SCORE:
0.4197
DSS_SCORE:
0.4424
HELIX:
0.0938
FCONS_SCORE:
0.9966
RIG_SCORE:
0.7553
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I354F
TCGA-AN-A04C
BRCA
TCGA
TKENG
DEG_APCC_KENBOX_2
0.1667
p.Q370H
TCGA-D1-A15X
UCEC
TCGA
TKENG
DEG_APCC_KENBOX_2
0.1667
p.N363H
TCGA-EE-A2GO
SKCM
TCGA
TKENG
DEG_APCC_KENBOX_2
0.7423
p.F356S
TCGA-YG-AA3N
SKCM
TCGA
TKENG
DEG_APCC_KENBOX_2
0.2222
p.S374C
DO44352
CESC
ICGC
TKENG
DEG_APCC_KENBOX_2
0.0556
p.V361G
DO47811
STAD
ICGC
TKENG
DEG_APCC_KENBOX_2
0.7532
p.I350V
DO41823
UCEC
ICGC
TKENG
DEG_APCC_KENBOX_2
0.0556
p.R355C
SIDM01619
Endometrial Carcinoma
GDSC
TKENG
DEG_APCC_KENBOX_2
0.1944
p.R355C
ACH-000984
Endometrial/Uterine Cancer
CCLE
TKENG
DEG_APCC_KENBOX_2
0.1944
p.R352C
ACH-001518
Endometrial/Uterine Cancer
CCLE
TKENG
DEG_APCC_KENBOX_2
0.1111
Drug responses associated with KDM3B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TKENG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P11137
Microtubule-associated protein 2
DEG_APCC_KENBOX_2
70:74
TKENG
APC,CDC20,FZR1
0.9942
More...
Q08AE8
Protein spire homolog 1
DEG_APCC_KENBOX_2
435:439
TKENG
APC,CDC20,FZR1
0.9955
More...
Q7LBC6
Lysine-specific demethylase 3B
DEG_APCC_KENBOX_2
360:364
TKENG
APC,CDC20,FZR1
0.6934
More...
Q8TEK3
Histone-lysine N-methyltransferase, H3 lysine-79 specific
DEG_APCC_KENBOX_2
807:811
TKENG
APC,CDC20,FZR1
0.9898
More...
Q9HD67
Unconventional myosin-X
DEG_APCC_KENBOX_2
1274:1278
TKENG
APC,CDC20,FZR1
0.9258
More...