DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VETTS
Uniprot ID:
Q96RL1
Source protein:
BRCA1-A complex subunit RAP80
Source gene:
UIMC1
Class:
DEG_SPOP_SBC_1
Location:
22:26
E3 ligase:
SPOP
DEGRON score:
0.9963
ASA_SCORE:
99.52
COIL:
0.8078
CONS_SCORE:
0.2453
DSS_SCORE:
0.4362
HELIX:
0.1684
FCONS_SCORE:
0.7411
RIG_SCORE:
0.7351
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S27Y
TCGA-13-0893
OV
TCGA
VETTS
DEG_SPOP_SBC_1
0.75
p.S27Y
DO29002
OV
ICGC
VETTS
DEG_SPOP_SBC_1
0.75
p.S14F
TCGA-EB-A3XF
SKCM
TCGA
VETTS
DEG_SPOP_SBC_1
0.1111
p.S14F
TCGA-FD-A3SS
BLCA
TCGA
VETTS
DEG_SPOP_SBC_1
0.1111
p.S14F
DO737
BLCA
ICGC
VETTS
DEG_SPOP_SBC_1
0.1111
p.S14F
DO37437
SKCM
ICGC
VETTS
DEG_SPOP_SBC_1
0.1111
p.E13K
TCGA-EO-A3B0
UCEC
TCGA
VETTS
DEG_SPOP_SBC_1
0.0833
p.E13K
DO219773
UCEC
ICGC
VETTS
DEG_SPOP_SBC_1
0.0833
p.R34S
DO229041
LICA
ICGC
VETTS
DEG_SPOP_SBC_1
0.1111
p.S14Y
DO46368
OV
ICGC
VETTS
DEG_SPOP_SBC_1
0.1111
p.R14C
SNU-175
large_intestine
COSMIC
VETTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with UIMC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98160
Basement membrane-specific heparan sulfate proteoglycan core protein
DEG_SPOP_SBC_1
249:253
VETTS
SPOP
0.9944
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
151:155
VETTS
SPOP
0.9829
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9523:9527
VETTS
SPOP
0.6786
More...
Q96RL1
BRCA1-A complex subunit RAP80
DEG_SPOP_SBC_1
22:26
VETTS
SPOP
0.9963
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_SPOP_SBC_1
244:248
VETTS
SPOP
0.995
More...