DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VETTS
Uniprot ID:
Q9HCK1
Source protein:
DBF4-type zinc finger-containing protein 2
Source gene:
ZDBF2
Class:
DEG_SPOP_SBC_1
Location:
244:248
E3 ligase:
SPOP
DEGRON score:
0.995
ASA_SCORE:
80.12
COIL:
0.7296
CONS_SCORE:
0.5564
DSS_SCORE:
0.5942
HELIX:
0.0838
FCONS_SCORE:
1.0506
RIG_SCORE:
0.6824
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S248L
TCGA-93-8067
LUAD
TCGA
VETTS
DEG_SPOP_SBC_1
0.7667
p.S248L
DO25113
LUAD
ICGC
VETTS
DEG_SPOP_SBC_1
0.7667
p.P240R
TCGA-CC-A8HT
LIHC
TCGA
VETTS
DEG_SPOP_SBC_1
0.2222
p.P240R
DO52187
LIHC
ICGC
VETTS
DEG_SPOP_SBC_1
0.2222
p.S250L
TCGA-EE-A20C
SKCM
TCGA
VETTS
DEG_SPOP_SBC_1
0.2778
p.S250L
TCGA-FR-A726
SKCM
TCGA
VETTS
DEG_SPOP_SBC_1
0.2778
p.S250L
TCGA-WE-A8K4
SKCM
TCGA
VETTS
DEG_SPOP_SBC_1
0.2778
p.S250L
DO222775
MELA
ICGC
VETTS
DEG_SPOP_SBC_1
0.2778
p.S250L
DO48665
SKCM
ICGC
VETTS
DEG_SPOP_SBC_1
0.2778
p.S250L
DO47665
SKCM
ICGC
VETTS
DEG_SPOP_SBC_1
0.2778
p.S250L
DO51281
SKCM
ICGC
VETTS
DEG_SPOP_SBC_1
0.2778
p.H254Q
TCGA-XQ-A8TA
PRAD
TCGA
VETTS
DEG_SPOP_SBC_1
0.1667
p.H254Q
DO223662
PRAD
ICGC
VETTS
DEG_SPOP_SBC_1
0.1667
p.H254R
DO20604
KIRC
ICGC
VETTS
DEG_SPOP_SBC_1
0.1667
p.Y251N
DO220855
MELA
ICGC
VETTS
DEG_SPOP_SBC_1
0.25
p.Y251I
DO220855
MELA
ICGC
VETTS
DEG_SPOP_SBC_1
0.25
p.P238S
DO222753
MELA
ICGC
VETTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with ZDBF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98160
Basement membrane-specific heparan sulfate proteoglycan core protein
DEG_SPOP_SBC_1
249:253
VETTS
SPOP
0.9944
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
151:155
VETTS
SPOP
0.9829
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9523:9527
VETTS
SPOP
0.6786
More...
Q96RL1
BRCA1-A complex subunit RAP80
DEG_SPOP_SBC_1
22:26
VETTS
SPOP
0.9963
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_SPOP_SBC_1
244:248
VETTS
SPOP
0.995
More...